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Improved Transcriptome Assembly Using a Hybrid of Long and Short Reads with StringTie

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.12.08.471868Source: DataRank Database

Improved Transcriptome Assembly Using a Hybrid of Long and Short Reads with StringTie is a research paper published in bioRxiv (Cold Spring Harbor Laboratory) (2021). On theSindex it has a DataRank of 0. It has been cited 15 times.

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Open Access15 citations

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Authors (4)

Brandon Wong ORCID,Geo Pertea ORCID,Mihaela Pertea ORCID,Alaina Shumate ORCID

Live enrichment

PubMed:35648784

National Science Foundation

Grant: 1759518

ABI Development: Improving transcriptome assembly from RNA-seq data

goldLicense: CC BY

publisherhttps://syndication.highwire.org/content/doi/10.1101/2021.12.08.471868

Unpaywallhttps://www.biorxiv.org/content/biorxiv/early/2021/12/10/2021.12.08.471868.full.pdf

https://doi.org/10.1101/2021.12.08.471868

https://doi.org/10.1371/journal.pcbi.1009730

https://pubmed.ncbi.nlm.nih.gov/35648784

Fields of Study

0301 basic medicine0303 health sciences03 medical and health sciences

Keywords

QH301-705.5Sequence Analysis, RNAHigh-Throughput Nucleotide SequencingExonsSequence Analysis, DNAMiceAnimalsHumansBiology (General)TranscriptomeAlgorithmsSoftwareResearch Article

Additional file 1 of Bookend: precise transcript reconstruction with end-guided assembly

10.6084/m9.figshare.20188760.v1figshare

Additional file 1 of Bookend: precise transcript reconstruction with end-guided assembly

10.6084/m9.figshare.20188760figshare

Additional file 3 of Bookend: precise transcript reconstruction with end-guided assembly

10.6084/m9.figshare.20188766.v1figshare

Additional file 3 of Bookend: precise transcript reconstruction with end-guided assembly

10.6084/m9.figshare.20188766figshare

Additional file 4 of Bookend: precise transcript reconstruction with end-guided assembly

10.6084/m9.figshare.20188769.v1figshare

Additional file 4 of Bookend: precise transcript reconstruction with end-guided assembly

10.6084/m9.figshare.20188769figshare