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Uncovering hidden assembly artifacts: when unitigs are not safe and bidirected graphs are not helpful

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.01.20.477068Source: DataRank Database

Uncovering hidden assembly artifacts: when unitigs are not safe and bidirected graphs are not helpful is a research paper published in bioRxiv (Cold Spring Harbor Laboratory) (2022). On theSindex it has a DataRank of 0. It has been cited 1 time.

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Open Access1 citations

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›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (2 grants)OA: greenTopics (17)IDs (PubMed, OpenAlex)

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Authors (2)

Paul Medvedev ORCID,Amatur Rahman ORCID

Live enrichment

PubMed:26207759 OpenAlex:https://openalex.org/W4206980580

National Science Foundation

Grant: 1453527

CAREER: De Novo Assembly of Large Genomic Data

National Science Foundation

Grant: 1931531

Frameworks: Re-Engineering Galaxy for Performance, Scalability and Energy Efficiency

greenLicense: cc-by

repositoryhttps://www.biorxiv.org/content/biorxiv/early/2022/05/06/2022.01.20.477068.full.pdf

repositoryhttps://doi.org/10.1101/2022.01.20.477068

https://www.biorxiv.org/content/biorxiv/early/2022/01/22/2022.01.20.477068.full.pdf

Fields of Study

Genomics and Phylogenetic StudiesMicrobial Community Ecology and PhysiologyBacteriophages and microbial interactions0301 basic medicine03 medical and health sciences0206 medical engineering02 engineering and technology

Keywords

De Bruijn graphDe Bruijn sequenceSubstringComputer scienceTheoretical computer scienceAlgorithmGraphMathematicsCombinatoricsData structure