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SpecDB: A Relational Database for Archiving Biomolecular NMR Spectra Data

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.02.12.480212Source: DataRank Database

SpecDB: A Relational Database for Archiving Biomolecular NMR Spectra Data is a dataset published in bioRxiv (Cold Spring Harbor Laboratory) (2022). On theSindex it has a DataRank of 0, placing it in the top 100% of the data-sharing corpus.

Top 100%percentile

0DataRank

Ranks in the top 100% for downstream scientific impact

Data paper Open Access0 citations

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›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (2 grants)OA: greenTopics (32)IDs (PubMed, OpenAlex)SDGs (1)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (1/3)

Dataset classification

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Authors (8)

Yuanpeng J. Huang ORCID,Theresa A. Ramelot ORCID,G.V.T. Swapna ORCID,Arwin Lashawn Anak Kendary ORCID,Ethan H. Li ORCID

Live enrichment

PubMed:19162232 OpenAlex:https://openalex.org/W4213201491

National Institutes of Health

Grant: 3R01GM120574-05S1

Membrane Protein Structure Using Evolutionary Couplings and Sparse NMR Data

National Institutes of Health

Grant: 5R35GM141818-03

Hybrid Methods for Dynamic Structure Analysis of Proteins from Pathogenic Microorganisms

greenLicense: cc-by-nc

repositoryhttps://www.biorxiv.org/content/biorxiv/early/2022/02/15/2022.02.12.480212.full.pdf

publisherhttps://syndication.highwire.org/content/doi/10.1101/2022.02.12.480212

repositoryhttps://doi.org/10.1101/2022.02.12.480212

https://doi.org/10.1016/j.jmr.2022.107268

Fields of Study

Metabolomics and Mass Spectrometry StudiesProtein Structure and DynamicsBioinformatics and Genomic Networks0301 basic medicine0303 health sciences03 medical and health sciences

Keywords

Computer sciencePython (programming language)MetadataSoftwareRelational databaseData miningData scienceDatabaseInformation retrievalWorld Wide WebProgramming languageSQLMagnetic Resonance SpectroscopySpectrum databaseNuclear Magnetic ResonanceBiophysics1.5 Resources and infrastructure (underpinning)Physical sciencesEngineeringNetworking and Information Technology R&D (NITRD)Underpinning researchMachine learningBiomolecular NMRGeneric health relevanceNuclear Magnetic Resonance, BiomolecularBiomolecular

Sustainable Development Goals

SDG 0: Industry, innovation and infrastructure