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Elevator mechanism dynamics in a sodium-coupled dicarboxylate transporter

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.05.01.490196Source: DataRank Database

Elevator mechanism dynamics in a sodium-coupled dicarboxylate transporter is a research paper published in bioRxiv (Cold Spring Harbor Laboratory) (2022). On theSindex it has a DataRank of 0.543. It has been cited 14 times, with 11 citing works in its 1-hop citation network.

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0.543DataRank · unranked

Scored on demand from live citation data

Open Access14 citations · 11 citing works in its network

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datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (10 grants)OA: greenTopics (31)IDs (PubMed, OpenAlex)Annotations (1)SDGs (1)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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DataRank Breakdown

Base Score 75%Citation Network 25%

Base Score Contribution

0.406

From this paper's citation signal

Citation Network Contribution

0.137

From 6 citing papers with measurable signal

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Top 5 citers driving the network score

Ranked by each citer's contribution to N(p) — log1p(C_q) divided by its reference count — out of 11 citers.

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Trends in Biochemical Sciences20238 citations61 referencesContributes 0.036
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eLife20242 citations48 referencesContributes 0.023
Molecular determinants of Neu5Ac binding to a tripartite ATP independent periplasmic (TRAP) transporter
eLife20252 citations58 referencesContributes 0.019
Molecular determinants of Neu5Ac binding to a tripartite ATP independent periplasmic (TRAP) transporter
bioRxiv (Cold Spring Harbor Laboratory)20242 citations59 referencesContributes 0.019

Authors (12)

Maria Lopez-Redondo ORCID,Christopher Mulligan ORCID,David B. Sauer ORCID,Jennifer J. Marden ORCID,Jinmei Song ORCID

Live enrichment

PubMed:19162232 OpenAlex:https://openalex.org/W4225371151

Biotechnology and Biological Sciences Research Council

Grant: BB/V007424/1

Probing the interplay of substrate and lipid interactions in the mechanism of a transporter family linked to age-related metabolic diseases and cancer

National Institutes of Health

Grant: 3R01GM084288-11S1

A state-of-the-art, single-molecule fluorescence microscopy system for mechanistic studies of protein synthesis

National Institutes of Health

Grant: 5R01GM137608-03

The structural dynamics of ribosomal frameshifting and ribosome rescue

National Institutes of Health

Grant: 5R01GM127883-04

Rational engineering of improved protein crystallization

National Institutes of Health

Grant: 5R01GM123455-05

Toolkit for High-Resolution Structure and Dynamics of Functional Lipids

National Institutes of Health

Grant: 3R35GM144109-02S1

Molecular Mechanisms of Ion Transport - Equipment supplement

National Institutes of Health

Grant: 1R01DK099023-01

Structural and mechanistic studies of INDY proteins

National Institutes of Health

Grant: 1R01NS108151-01

Molecular mechanism of citrate transporter NaCT and its mutations that cause pediatric epilepsies

National Institutes of Health

Grant: 5P41GM104601-30

Center for Macromolecular Modeling and Bioinformatics

National Institutes of Health

Grant: 1R01GM121994-01

Structural basis of the Ragulator-Rag GTPase complex as a platform for mTOR activation on the lysosomal surface

greenLicense: cc-by-nc-nd

repositoryhttps://www.biorxiv.org/content/biorxiv/early/2022/06/09/2022.05.01.490196.full.pdf

publisherhttps://syndication.highwire.org/content/doi/10.1101/2022.05.01.490196

repositoryhttps://doi.org/10.1101/2022.05.01.490196

Europe_PMChttps://europepmc.org/article/PPR/PPR487956

Fields of Study

Lipid Membrane Structure and BehaviorDrug Transport and Resistance MechanismsProtein Structure and Dynamics0301 basic medicine0303 health sciences03 medical and health sciences

Keywords

Förster resonance energy transferTransporterChemistrySubstrate (aquarium)Lipid bilayerBiophysicsMolecular dynamicsMechanism (biology)Coupling (piping)MembraneFluorescenceComputational chemistryPhysicsBiochemistryMaterials scienceBiologyDicarboxylic Acid TransportersKineticsBacterial ProteinsSodiumLipid BilayersFluorescence Resonance Energy TransferBiological TransportVibrio choleraeArticle

Sustainable Development Goals

SDG 0: Affordable and clean energy

Elevator mechanism dynamics in a sodium-coupled dicarboxylate transporter

FAIR Checklist

DataRank Breakdown

Top 5 citers driving the network score

Authors (12)

Funding (10 grants)

Open Access

Topics

Annotations (Europe PMC)