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SOPHIE: viral outbreak investigation and transmission history reconstruction in a joint phylogenetic and network theory framework

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.05.05.490757Source: DataRank Database

SOPHIE: viral outbreak investigation and transmission history reconstruction in a joint phylogenetic and network theory framework is a research paper published in bioRxiv (Cold Spring Harbor Laboratory) (2022). On theSindex it has a DataRank of 0. It has been cited 1 time.

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Open Access1 citations

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datarank_citation_only_1hop_v6· scope data_onlyMethodology

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Enrichment:Funding (2 grants)OA: greenTopics (25)IDs (PubMed, OpenAlex)SDGs (1)

FAIR Checklist

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Findable (1/2)

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Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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Authors (7)

Fatemeh Mohebbi ORCID,Vyacheslav Tsyvina,Pelin Icer Baykal ORCID,Alina Nemira ORCID,Sumathi Ramachandran ORCID

Live enrichment

PubMed:19162232 OpenAlex:https://openalex.org/W4229017155

National Science Foundation

Grant: 2047828

CAREER: Addressing Algorithmic Challenges in Computational Genomic Epidemiology

National Institutes of Health

Grant: 5R01EB025022-03

QuBBD: Viral Evolution and Spread of Infectious Disease in Complex Network: Big Data Analysis and Modeling

greenLicense: cc-by-nd

repositoryhttps://www.biorxiv.org/content/biorxiv/early/2022/05/05/2022.05.05.490757.full.pdf

publisherhttps://syndication.highwire.org/content/doi/10.1101/2022.05.05.490757

repositoryhttps://doi.org/10.1101/2022.05.05.490757

https://doi.org/10.1016/j.cels.2022.07.005

Fields of Study

Evolution and Genetic DynamicsHIV Research and TreatmentVirology and Viral Diseases0301 basic medicine0303 health sciences03 medical and health sciences

Keywords

Phylogenetic treeOutbreakTransmission (telecommunications)Computer scienceBayesian probabilityScalabilityHost (biology)Data scienceTheoretical computer scienceBiologyArtificial intelligenceEcologyVirologyGeneticsGeneBayes TheoremGenomicsPhylogenyDisease Outbreaks

Sustainable Development Goals

SDG 0: Good health and well-being