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The landscape of tolerated genetic variation in humans and primates

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.01.538953Source: DataRank Database

The landscape of tolerated genetic variation in humans and primates is a research paper published in bioRxiv (Cold Spring Harbor Laboratory) (2023). On theSindex it has a DataRank of 0.782. It has been cited 24 times, with 17 citing works in its 1-hop citation network.

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0.782DataRank · unranked

Scored on demand from live citation data

Open Access24 citations · 17 citing works in its network

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›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (22 grants)OA: greenTopics (49)IDs (PubMed, OpenAlex)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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DataRank Breakdown

Base Score 62%Citation Network 38%

Base Score Contribution

0.483

From this paper's citation signal

Citation Network Contribution

0.299

From 11 citing papers with measurable signal

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Top 5 citers driving the network score

Ranked by each citer's contribution to N(p) — log1p(C_q) divided by its reference count — out of 17 citers.

A DNA language model based on multispecies alignment predicts the effects of genome-wide variants
Nature Biotechnology202571 citations71 referencesContributes 0.060
New insights shed light on the enigma of genetic diversity and species complexity
Science China Life Sciences20242 citations21 referencesContributes 0.052
A Phylogenetic Approach to Genomic Language Modeling
Lecture notes in computer science20254 citations37 referencesContributes 0.043
Deep generative modeling of the human proteome reveals over a hundred novel genes involved in rare genetic disorders
Research Square20245 citations44 referencesContributes 0.041
Leveraging protein structural information to improve variant effect prediction
Current Opinion in Structural Biology202529 citations85 referencesContributes 0.040

Authors (97)

Tobias Hamp,Jeffrey M. Ede ORCID,Joshua G. Schraiber ORCID,Jeremy F. McRae ORCID,Moriel Singer‐Berk ORCID

Live enrichment

PubMed:37205491 OpenAlex:https://openalex.org/W4367676667

National Science Foundation

Grant: 1848954

Life-history and behavioral consequences of competition between solitary and pair-bonded primate conspecifics

European Commission

Grant: 801505

Individual Fellowships at the Université libre de Bruxelles

National Science Foundation

Grant: 0621020

Social Monogamy in Free-ranging Owl Monkeys (Aotus azarai azarai) of Argentina

National Science Foundation

Grant: 1219368

RAPID Twinning in Monogamous Owl Monkeys of the Argentinean Chaco: Developmental and Behavioral Consequences

UK Research and Innovation

Grant: NE/T000341/1

"Rise of the continent of the monkeys": an integrated genomic and fossil-based analysis of the adaptive radiation of New World primates

Natural Sciences and Engineering Research Council of Canada

Grant: unidentified

unidentified

National Institutes of Health

Grant: 1R01HG010898-01A1

Identification of Genetic and Molecular Bases of Derived Phenotypes in Primate Brain Development

National Science Foundation

Grant: 1232349

Costs and Benefits of Biparental Care in Monogamous Owl Monkeys

National Institutes of Health

Grant: 5R24HD044964-03

Population Research Center

National Science Foundation

Grant: 1952072

IRES Track I: Behavioral Ecology, Demography and Conservation of Primates in the Humid Chaco of Argentina

National Science Foundation

Grant: 1503753

Costs and Benefits of Biparental Care in Monogamous Owl Monkeys

European Commission

Grant: 847648

Junior Leader la Caixa Postdoctoral Fellowship Programme: Shaping the new generation of leaders in research

National Institutes of Health

Grant: 5P30AG012836-13

EXTERNAL INNOVATIVE NETWORK CORE

National Science Foundation

Grant: 1540255

Doctoral Dissertation Research: Leaving home: genetic, endocrine, and behavioral correlates of dispersal in monogamous monkeys

National Institutes of Health

Grant: 5P40OD024628-05

Specific Pathogen Free Baboon Research Resource (SPFBRR)

National Science Foundation

Grant: 1029451

Collaborative Research: A Multidisciplinary, Field-Based Study of the Little-Known Kinda Baboon (Papio cynocephalus kindae)

European Commission

Grant: 864203

Great ape genome variation now and then: current diversity and genomic relics of extinct primates

NHGRI NIH HHS

Grant: R01 HG010898

NIA NIH HHS

Grant: P30 AG012836

NICHD NIH HHS

Grant: R24 HD044964

NIGMS NIH HHS

Grant: T32 GM007748

NIH HHS

Grant: P40 OD024628

greenLicense: cc-by-nc-nd

repositoryhttps://www.biorxiv.org/content/biorxiv/early/2023/05/02/2023.05.01.538953.1.full.pdf

publisherhttps://syndication.highwire.org/content/doi/10.1101/2023.05.01.538953

repositoryhttp://dx.doi.org/10.1101/2023.05.01.538953

repositoryhttps://pubmed.ncbi.nlm.nih.gov/37205491

Fields of Study

Genomics and Rare DiseasesGenetic Associations and EpidemiologyCancer Genomics and Diagnostics0301 basic medicine03 medical and health sciences

Keywords

BiologyGenetic variationHuman genomeHuman genetic variationPrimateGenomeGeneticsAlleleEvolutionary biologyDECIPHERGenetic variantsComputational biology1000 Genomes ProjectHuman geneticsPersonalized medicineGeneGenotypeSingle-nucleotide polymorphismNeurosciencePrimates570Medical Sciences106014 Genomics610ArticleBiomedical InformaticsSDG 3 - Good Health and Well-beingGene FrequencyMedical SpecialtiesMedicine and Health Sciences106014 Genomikand ImmunityAnimalsHumansBiological PhenomenaGenètica humanaBase SequenceWhole Genome SequencingCell PhenomenaLife SciencesGenetics and GenomicsMedical Molecular BiologySDG 3 – Gesundheit und WohlergehenMedical Genetics