Pilot corpus: NIH-funded biomedical datasets. Any DOI can be scored on demand — network effects sharpen as coverage grows.

A Perturbation Cell Atlas of Human Induced Pluripotent Stem Cells

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.11.03.621734Source: DataRank Database

A Perturbation Cell Atlas of Human Induced Pluripotent Stem Cells is a dataset published in bioRxiv (Cold Spring Harbor Laboratory) (2024). On theSindex it has a DataRank of 0.447, placing it in the top 42.1% of the data-sharing corpus. It has been cited 8 times, with 6 citing works in its 1-hop citation network.

Top 42%percentile

0.447DataRank

Ranks in the top 42% for downstream scientific impact

Data paper Open Access8 citations · 6 citing works in its network

Download PDF

Cite:

Linked data & code

hpa doi

DataRank reads this dataset's downstream impact straight off the citation graph — no black box, no proprietary weighting. How is this computed?

›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (13 grants)OA: greenTopics (17)Linked Datasets (6)DataCite Reuse (6)IDs (PubMed, OpenAlex)Annotations (2)

FAIR Checklist

Context only (not used in score)

Findable (2/2)

Has DOI
Indexed in repositories

Accessible (1/2)

Open Access

Interoperable (2/2)

DataCite relations
Linked datasets

Reusable (1/3)

Dataset classification

FAIR checklist signals are shown for context only and do not affect DataRank scoring.

Run a calibrated FAIR evaluation for this paper →

We only score data papers we can read in full — never from an abstract alone.

DataRank Breakdown

Base Score 74%Citation Network 26%

Base Score Contribution

0.330

From this paper's citation signal

Citation Network Contribution

0.117

From 5 citing papers with measurable signal

Learn more about DataRank methodology →

Top 5 citers driving the network score

Ranked by each citer's contribution to N(p) — log1p(C_q) divided by its reference count — out of 6 citers.

X-Atlas/Orion: Genome-wide Perturb-seq Datasets via a Scalable Fix-Cryopreserve Platform for Training Dose-Dependent Biological Foundation Models
bioRxiv (Cold Spring Harbor Laboratory)202532 citations48 referencesContributes 0.073
A chromatin-focused CRISPR screen identifies USP22 as a barrier to somatic cell reprogramming
Communications Biology20253 citations73 referencesContributes 0.019
Genome-scale perturb-seq in primary human CD4+ T cells maps context-specific regulators of T cell programs and human immune traits
bioRxiv (Cold Spring Harbor Laboratory)202514 citations166 referencesContributes 0.016
Regulatory network hubs guide dynamic human lineage specification
bioRxiv (Cold Spring Harbor Laboratory)20253 citations86 referencesContributes 0.016
Clinical translation of human iPSC technologies: advances, safety concerns, and future directions
Frontiers in Cell and Developmental Biology202517 citations209 referencesContributes 0.014

Authors (23)

Yesh Doctor,Amir Dailamy ORCID,Antoine Forget ORCID,Yi-Hung Lee,Becky Chinn

Live enrichment

PubMed:39574586 OpenAlex:https://openalex.org/W4404020016

Dutch Research Council (NWO)

Grant: 019.231EN.013

National Institutes of Health

Grant: 3OT2OD032742-01S3

Bridge2AI: Cell Maps for AI (CM4AI) Data Generation Project

National Institutes of Health

Grant: 1S10OD026929-01

Illumina NovaSeq 6000 Sequencing System

National Institutes of Health

Grant: 1U54CA274502-01

The Cancer Cell Map Initiative v2.0

National Institutes of Health

Grant: 5R01HG012351-02

Next generation massively multiplexed combinatorial genetic screens

National Institutes of Health

Grant: 1R01NS131560-01A1

NEURAXIAL AAVS TARGETING DRG CHANNELS INVOLVED IN CHRONIC POST INFLAMMATORY PAIN

National Institutes of Health

Grant: 3P30CA023100-25S4

Specialized Cancer Center Support Grant

NINDS NIH HHS

Grant: R01 NS131560

NIH HHS

Grant: S10 OD026929

NCI NIH HHS

Grant: P30 CA023100

NIH HHS

Grant: OT2 OD032742

NHGRI NIH HHS

Grant: R01 HG012351

NCI NIH HHS

Grant: U54 CA274502

greenLicense: cc-by-nc-nd

repositoryhttps://doi.org/10.1101/2024.11.03.621734

publisherhttps://syndication.highwire.org/content/doi/10.1101/2024.11.03.621734

repositoryhttps://pubmed.ncbi.nlm.nih.gov/39574586

repositoryhttps://www.ncbi.nlm.nih.gov/pmc/articles/11580897

Fields of Study

Pluripotent Stem Cells ResearchSingle-cell and spatial transcriptomicsCRISPR and Genetic Engineering0303 health sciences03 medical and health sciences

Keywords

Induced pluripotent stem cellAtlas (anatomy)Perturbation (astronomy)Stem cellBiologyCell biologyPhysicsEmbryonic stem cellAnatomyGeneticsQuantum mechanicsArticle

Cell Maps for Artificial Intelligence - June 2026 Data Release (Beta)

10.18130/v3/higt4cUniversity of Virginia Dataverse

A genome-scale CRISPRi perturbation atlas of human induced pluripotent stem cells

10.25452/figshare.plus.27261219.v1Figshare+

A genome-scale CRISPRi perturbation atlas of human induced pluripotent stem cells

10.25452/figshare.plus.27261219Figshare+

Cell Maps for Artificial Intelligence - October 2025 Data Release (Beta)

10.18130/v3/k7tgemUniversity of Virginia Dataverse

Cell Maps for Artificial Intelligence - June 2025 Data Release (Beta)

10.18130/v3/f3td5rUniversity of Virginia Dataverse

Cell Maps for Artificial Intelligence - March 2025 Data Release (Beta)

10.18130/v3/b35xwxUniversity of Virginia Dataverse