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Disobind: a sequence-based, partner-dependent contact map and interface residue predictor for intrinsically disordered regions

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.12.19.629373Source: DataRank Database

Disobind: a sequence-based, partner-dependent contact map and interface residue predictor for intrinsically disordered regions is a research paper published in bioRxiv (Cold Spring Harbor Laboratory) (2024). On theSindex it has a DataRank of 0.189. It has been cited 2 times, with 2 citing works in its 1-hop citation network.

N/A

0.189DataRank · unranked

Scored on demand from live citation data

Open Access2 citations · 2 citing works in its network

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›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (6 grants)OA: greenTopics (25)IDs (PubMed, OpenAlex)SDGs (1)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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DataRank Breakdown

Base Score 87%Citation Network 13%

Base Score Contribution

0.165

From this paper's citation signal

Citation Network Contribution

0.0242

From 2 citing papers with measurable signal

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Top 2 citers driving the network score

Ranked by each citer's contribution to N(p) — log1p(C_q) divided by its reference count — out of 2 citers.

AlphaFold 3: an unprecedent opportunity for fundamental research and drug development
Precision Clinical Medicine202540 citations163 referencesContributes 0.023
Progress Toward Antigenic Epitopes of African Swine Fever Virus and Their Identification
Transboundary and Emerging Diseases20251 citations121 referencesContributes 0.006

Authors (3)

Varun Ullanat ORCID,Shruthi Viswanath ORCID,Kartik Majila ORCID

Live enrichment

PubMed:39763873 OpenAlex:https://openalex.org/W4405627238

Grant: RTI 4006

Grant: BT/PR40323/BTIS/137/78/2023

National Institutes of Health

Grant: 5R01GM129325-08

ChimeraX -- Next Generation Visualization and Analysis Software for Multiscale Modeling

National Institutes of Health

Grant: 5P41RR001081-29

FUNCTIONAL PROMISCUITY IN O-SUCCINYLBENZOATE SYNTHASE

NCRR NIH HHS

Grant: P41 RR001081

NIGMS NIH HHS

Grant: R01 GM129325

greenLicense: cc-by-nd

repositoryhttps://www.biorxiv.org/content/biorxiv/early/2024/12/20/2024.12.19.629373.full.pdf

publisherhttps://syndication.highwire.org/content/doi/10.1101/2024.12.19.629373

repositoryhttps://doi.org/10.1101/2024.12.19.629373

repositoryhttps://pubmed.ncbi.nlm.nih.gov/39763873

Fields of Study

Protein Structure and DynamicsMicrobial Metabolic Engineering and BioproductionEnzyme Structure and Function0206 medical engineering02 engineering and technology

Keywords

Intrinsically disordered proteinsSequence (biology)Protein–protein interactionComputational biologyComputer scienceProtein structureChemistryBiologyBiophysicsBiochemistryProtein FoldingBinding SitesDeep LearningHumansAmino Acid SequenceProtein BindingIntrinsically disordered proteins (IDP)deep learning (DL)intrinsically disordered regions (IDR)protein language model (pLMs)

Sustainable Development Goals

SDG 0: Partnerships for the goals