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Structural basis for ring-opening fluorescence by the RhoBAST RNA aptamer

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.12.30.630784Source: DataRank Database

Structural basis for ring-opening fluorescence by the RhoBAST RNA aptamer is a research paper published in bioRxiv (Cold Spring Harbor Laboratory) (2024). On theSindex it has a DataRank of 0.

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Enrichment:Funding (9 grants)OA: greenTopics (32)IDs (PubMed, OpenAlex)SDGs (1)

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Authors (6)

Aleksandra J. Wierzba ORCID,Shelby R. Lennon ORCID,Lukasz T. Olenginski ORCID,Amy E. Palmer ORCID,Robert Batey ORCID

Live enrichment

PubMed:39803439 OpenAlex:https://openalex.org/W4405951853

National Institutes of Health

Grant: 3R35GM139644-03S2

lluminating the biochemistry of zinc and RNA in live cells

National Institutes of Health

Grant: 1S10OD034218-01

Acquisition of multi-mode, high-resolution, high-sensitivity imaging platform

National Science Foundation

Grant: 2404117

Tools4Cells: RNA-based biosensors for imaging metabolism in live cells

National Institutes of Health

Grant: 1R35GM152029-01

Riboswitches and their application to RNA visualization and transcription factor interactions with the transcriptome

National Institutes of Health

Grant: 2P30GM124169-06

ALS Efficiently Networking Advanced Beam Line Experiments (ALS-ENABLE)

NIGMS NIH HHS

Grant: R35 GM152029

NIH HHS

Grant: S10 OD034218

NIGMS NIH HHS

Grant: T32 GM065103

NIGMS NIH HHS

Grant: T32 GM145437

greenLicense: https://www.biorxiv.org/about/FAQ#license

repositoryhttps://www.biorxiv.org/content/biorxiv/early/2024/12/30/2024.12.30.630784.full.pdf

publisherhttps://syndication.highwire.org/content/doi/10.1101/2024.12.30.630784

repositoryhttps://doi.org/10.1101/2024.12.30.630784

repositoryhttps://pubmed.ncbi.nlm.nih.gov/39803439

Fields of Study

RNA and protein synthesis mechanismsAdvanced biosensing and bioanalysis techniquesCRISPR and Genetic EngineeringBiologyMedicineChemistry0301 basic medicine03 medical and health sciences

Keywords

AptamerBasis (linear algebra)FluorescenceRing (chemistry)RNAComputational biologyChemistryBiophysicsBiologyMolecular biologyBiochemistryPhysicsMathematicsGeneOpticsModels, MolecularBinding SitesRhodaminesMolecular and Structural BiologyNucleic Acid ConformationAptamers, NucleotideCrystallography, X-RayrhoB GTP-Binding ProteinFluorescent Dyes

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SDG 0: Life in Land