Large vision model framework for automated C. elegans analysis: From static morphometry to dynamic neural activity is a research paper published in bioRxiv (Cold Spring Harbor Laboratory) (2025). On theSindex it has a DataRank of 0. It has been cited 2 times.
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NIH HHS
Grant: P40 OD010440
Fields of Study
Keywords
Fiji- and TWARDIS-estimated head angles centered normalized from 0 to 180 degrees.
Fiji- and TWARDIS-estimated head angles centered normalized from 0 to 180 degrees.
Normalized fluorescence intensity and average absolute difference from mean for Fiji- and TWARDIS-extracted data of the loop compartment.
Normalized fluorescence intensity and average absolute difference from mean for Fiji- and TWARDIS-extracted data of the loop compartment.
Fiji- and TWARDIS-extracted head bending and fluorescence time-series values of 10 frames-per-second one minute recordings of wild-type worms in a microfluidic device expressing GCaMP3.3 in RIA.
Fiji- and TWARDIS-extracted head bending and fluorescence time-series values of 10 frames-per-second one minute recordings of wild-type worms in a microfluidic device expressing GCaMP3.3 in RIA.
Time-series metrics of a 10 frames-per-second one minute recording of a wild-type worm crawling on an agar plate with food.
Time-series metrics of a 10 frames-per-second one minute recording of a wild-type worm crawling on an agar plate with food.
Time-series metrics of a 10 frames-per-second one minute recording of a wild-type worm swimming in a liquid droplet.
Time-series metrics of a 10 frames-per-second one minute recording of a wild-type worm swimming in a liquid droplet.
Human and TWARDIS-extracted area and perimeter in pixels.
Human and TWARDIS-extracted area and perimeter in pixels.
RIA calcium imaging recording with axonal compartment segmentation, head angle, and calcium activity.
RIA calcium imaging recording with axonal compartment segmentation, head angle, and calcium activity.
Crawling recording with worm mask, head angle and speed.
Crawling recording with worm mask, head angle and speed.
Droplet swimming recording with worm mask and body curvature kymograph.
Droplet swimming recording with worm mask and body curvature kymograph.
Scatterplot of Fiji- versus TWARDIS-estimated head angles with sign ignored.
Scatterplot of Fiji- versus TWARDIS-estimated head angles with sign ignored.