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Developmentally regulated alternate 3′ end cleavage of nascent transcripts controls dynamic changes in protein expression in an adult stem cell lineage

Genes & Development(2022)10.1101/gad.349689.122Source: DataRank Database

Developmentally regulated alternate 3′ end cleavage of nascent transcripts controls dynamic changes in protein expression in an adult stem cell lineage is a research paper published in Genes & Development (2022). On theSindex it has a DataRank of 0.527. It has been cited 16 times, with 9 citing works in its 1-hop citation network.

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0.527DataRank · unranked

Scored on demand from live citation data

Open Access16 citations · 9 citing works in its network

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›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (17 grants)OA: goldTopics (43)IDs (PubMed, PMC, OpenAlex)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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DataRank Breakdown

Base Score 81%Citation Network 19%

Base Score Contribution

0.425

From this paper's citation signal

Citation Network Contribution

0.102

From 6 citing papers with measurable signal

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Top 5 citers driving the network score

Ranked by each citer's contribution to N(p) — log1p(C_q) divided by its reference count — out of 9 citers.

RpL38 modulates germ cell differentiation by controlling Bam expression in Drosophila testis
Science China Life Sciences202411 citations69 referencesContributes 0.036
Alternative cleavage and polyadenylation of the Ccnb1 mRNA defines accumulation of cyclin protein during the meiotic cell cycle
Nucleic Acids Research20238 citations81 referencesContributes 0.027
Deficiency of ValRS-m Causes Male Infertility in Drosophila melanogaster
International Journal of Molecular Sciences20244 citations66 referencesContributes 0.024
Paralog-dependent Specialization of Paf1C subunit, Ctr9, for Sex Chromosome Gene Regulation and Male Germline Differentiation in Drosophila
bioRxiv (Cold Spring Harbor Laboratory)20242 citations65 referencesContributes 0.017
Differentiation in the human urothelia is defined by distinct alternative polyadenylation
Cell Reports20261 citations62 referencesContributes 0.011

Authors (8)

Gonzalo H. Olivares ORCID,Lorenzo Gallicchio ORCID,Gokul Ramaswami ORCID,Álvaro Glavic ORCID,Patricio Olguı́n ORCID

Live enrichment

PubMed:36175033 PMC:PMC9575692 OpenAlex:https://openalex.org/W4297980945

National Institutes of Health

Grant: T32AR007422

NIH

Grant: R21HD079970

NIH

Grant: 1R01GM124054

NIH

Grant: R35GM136433

NIGMS NIH HHS

Grant: R01 GM124054

NIH HHS

Grant: S10 OD010580

National Institutes of Health

Grant: 5R01GM124054-02

Developmentally programmed translational control of specialized cell cycles in male meiosis

National Institutes of Health

Grant: 1S10OD010580-01A1

Nikon A1Rsi resonant spectral confocal microscope

National Institutes of Health

Grant: 5R35GM136433-02

Regulation of proliferation and differentiation in the male germ line adult stem cell lineage

National Institutes of Health

Grant: 1R21HD079970-01A1

Alternative polydenylation and the regulation of male germ cell differentiation

National Institutes of Health

Grant: 5T32AR007422-22

Postgraduate Training Program in Cutaneous Biology

Latin American Pew

American-Italian Cancer Foundation

Becas Chile

Stanford Graduate Fellowship

Reed-Hodgson Professorship in Human Biology

American Heart Association

goldLicense: cc-by-nc

journalhttps://doi.org/10.1101/gad.349689.122

publisherhttps://doi.org/10.1101/gad.349689.122

publisherhttps://syndication.highwire.org/content/doi/10.1101/gad.349689.122

repositoryhttps://pubmed.ncbi.nlm.nih.gov/36175033

repositoryhttps://www.ncbi.nlm.nih.gov/pmc/articles/9575692

Fields of Study

RNA Research and SplicingRNA modifications and cancerCancer-related gene regulation0301 basic medicine0303 health sciences03 medical and health sciences

MeSH Terms

AnimalsMaleRNA, MessengerProtein Isoforms3' Untranslated RegionsPolyadenylationAdult Stem CellsRNA Isoforms

Keywords

BiologyPolyadenylationCleavage stimulation factorUntranslated regionGene isoformThree prime untranslated regionCleavage (geology)PolysomeMessenger RNACleavage and polyadenylation specificity factorCell biologyRNA-binding proteinMolecular biologyGeneGeneticsRNARibosomeSpermatogenesistranslational controlMrna IsoformsAlternative PolyadenylationMaleAdult Stem CellsRNA IsoformsAnimalsProtein IsoformsRNA, Messenger3' Untranslated RegionsResearch Paper