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Somatic structural variation targets neurodevelopmental genes and identifies SHANK2 as a tumor suppressor in neuroblastoma

Genome Research(2020)10.1101/gr.252106.119Source: DataRank Database

Somatic structural variation targets neurodevelopmental genes and identifies SHANK2 as a tumor suppressor in neuroblastoma is a research paper published in Genome Research (2020). On theSindex it has a DataRank of 0. It has been cited 32 times.

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Open Access32 citations

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Enrichment:Funding (10 grants)OA: bronzeTopics (87)IDs (PubMed, PMC, OpenAlex)Annotations (2)SDGs (2)

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Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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Authors (18)

Karina L. Conkrite ORCID,Miriam Doepner ORCID,Komal S. Rathi ORCID,Apexa Modi ORCID,Zalman Vaksman ORCID

Live enrichment

PubMed:32796005 PMC:PMC7545140 OpenAlex:https://openalex.org/W3048983466

Children's Oncology Group

Grant: CA098543

NCI NIH HHS

Grant: U10 CA098543

NCI NIH HHS

Grant: R01 CA124709

NIAMS NIH HHS

Grant: T32 AR007465

CCR NIH HHS

Grant: HHSN261200800001C

NCI NIH HHS

Grant: R35 CA220500

NCI NIH HHS

Grant: R01 CA204974

NCI NIH HHS

Grant: HHSN261200800001E

National Institutes of Health

Grant: 1R35CA220500-01

Discovering mechanisms of neuroblastoma tumorigenesis to improve patient outcomes

National Institutes of Health

Grant: 5R01CA124709-02

The Genetic Basis of Neuroblastoma Tumorigenesis

bronzeLicense: CC BY NC

journalhttps://genome.cshlp.org/content/30/9/1228.full.pdf

GREENhttps://genome.cshlp.org/content/30/9/1228.full.pdf

publisherhttps://genome.cshlp.org/content/30/9/1228.full.pdf

publisherhttps://syndication.highwire.org/content/doi/10.1101/gr.252106.119

journalhttps://doi.org/10.1101/gr.252106.119

Fields of Study

Neuroblastoma Research and TreatmentsCancer, Hypoxia, and MetabolismGlioma Diagnosis and TreatmentBiologyMedicine0301 basic medicine0303 health sciences03 medical and health sciencesCell Line, TumorChromothripsisCohort StudiesDNA BreaksDNA Copy Number VariationsFemaleGenes, Tumor SuppressorGenomic Structural VariationHumansMaleN-Myc Proto-Oncogene ProteinNerve Tissue ProteinsNeuroblastomaNeurogenesisPolymorphism, Single NucleotideQuantitative Trait LociRNA, NeoplasmRNA-SeqRisk AssessmentTelomeraseTumor Cells, CulturedWhole Genome Sequencing

MeSH Terms

N-Myc Proto-Oncogene ProteinChromothripsisWhole Genome SequencingRNA-SeqFemaleHumansMaleNerve Tissue ProteinsNeuroblastomaRNA, NeoplasmTumor Cells, CulturedCohort StudiesGenes, Tumor SuppressorRisk AssessmentTelomerasePolymorphism, Single NucleotideQuantitative Trait LociCell Line, TumorDNA BreaksNeurogenesisGenomic Structural VariationDNA Copy Number Variations

Keywords

BiologyNeuroblastomaCopy-number variationGene duplicationPediatric cancerNeuroblastoma RAS viral oncogene homologSomatic cellGeneticsStructural variationCancer researchGeneGenomeCancerMutationKRASMaleChromothripsisN-Myc Proto-Oncogene ProteinDNA Copy Number VariationsResearchNeurogenesisDNA BreaksQuantitative Trait LociNerve Tissue ProteinsPolymorphism, Single NucleotideRisk AssessmentCohort StudiesCell Line, TumorGenomic Structural VariationHumansFemaleGenes, Tumor SuppressorRNA, NeoplasmRNA-SeqTelomerase

Sustainable Development Goals

SDG 3: 3. Good healthSDG 0: Good health and well-being

Somatic structural variation targets neurodevelopmental genes and identifies SHANK2 as a tumor suppressor in neuroblastoma

FAIR Checklist

Authors (18)

Funding (10 grants)

Open Access

Topics

Annotations (Europe PMC)