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TRACE: transcription factor footprinting using chromatin accessibility data and DNA sequence

Genome Research(2020)10.1101/gr.258228.119Source: DataRank Database

TRACE: transcription factor footprinting using chromatin accessibility data and DNA sequence is a research paper published in Genome Research (2020). On theSindex it has a DataRank of 0. It has been cited 26 times.

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Open Access26 citations

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Enrichment:Funding (4 grants)OA: hybridTopics (27)IDs (PubMed, PMC)Annotations (3)

FAIR Checklist

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Findable (1/2)

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Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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Authors (2)

Alan P. Boyle ORCID,Ningxin Ouyang ORCID

Live enrichment

PubMed:32660981 PMC:PMC7397869

National Human Genome Research Institute

Grant: U41 HG009293

NHGRI NIH HHS

Grant: U24 HG009293

National Institutes of Health

Grant: 5U41HG009293-02

RegulomeDB: A Resource for the Human Regulome

National Institutes of Health

hybridLicense: other-oa

publisherhttps://genome.cshlp.org/content/30/7/1040.full.pdf

publisherhttps://syndication.highwire.org/content/doi/10.1101/gr.258228.119

repositoryhttps://www.ncbi.nlm.nih.gov/pmc/articles/7397869

Europe_PMChttps://europepmc.org/articles/PMC7397869

Europe_PMChttps://europepmc.org/articles/PMC7397869?pdf=render

Fields of Study

0301 basic medicine0206 medical engineering02 engineering and technology03 medical and health sciences

MeSH Terms

Cell LineK562 CellsChromatinHumansDeoxyribonucleasesTranscription FactorsMarkov ChainsDNA FootprintingSequence Analysis, DNABinding SitesNucleotide Motifs

Keywords

Binding SitesDeoxyribonucleasesDNA FootprintingMethodSequence Analysis, DNAChromatinMarkov ChainsCell LineHumansNucleotide MotifsK562 CellsTranscription Factors

TRACE: transcription factor footprinting using chromatin accessibility data and DNA sequence

FAIR Checklist

Authors (2)

Funding (4 grants)

Open Access

Topics

Annotations (Europe PMC)