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ATAC-STARR-seq reveals transcription factor–bound activators and silencers within chromatin-accessible regions of the human genome

Genome Research(2022)10.1101/gr.276766.122Source: DataRank Database

ATAC-STARR-seq reveals transcription factor–bound activators and silencers within chromatin-accessible regions of the human genome is a research paper published in Genome Research (2022). On theSindex it has a DataRank of 0. It has been cited 84 times.

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Open Access84 citations

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Enrichment:Funding (5 grants)OA: bronzeTopics (33)IDs (PubMed, PMC, OpenAlex)Annotations (2)

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Authors (2)

Emily Hodges ORCID,Tyler Hansen ORCID

Live enrichment

PubMed:35858748 PMC:PMC9435738 OpenAlex:https://openalex.org/W4286210081

National Institutes of Health

Grant: K22 CA184308-03

Department of Defense Idea Award

Grant: W81XWH-20-1-0522

American Cancer Society (ACS) Institutional Research Grant

Grant: IRG-15-169-56

NCI NIH HHS

Grant: K22 CA184308

National Institutes of Health

Grant: 5K22CA184308-03

Dissecting Genetic and Epigenetic variation in the Cancer Regulome

bronzeLicense: http://creativecommons.org/licenses/by-nc/4.0/This article, published in Genome Research, is available under a Creative Commons License (Attribution-NonCommercial 4.0 International), as described at http://creativecommons.org/licenses/by-nc/4.0/ (http://creativecommons.org/licenses/by-nc/4.0/) .

journalhttps://genome.cshlp.org/content/32/8/1529.full.pdf

publisherhttps://genome.cshlp.org/content/32/8/1529.full.pdf

publisherhttps://syndication.highwire.org/content/doi/10.1101/gr.276766.122

journalhttps://doi.org/10.1101/gr.276766.122

repositoryhttps://pubmed.ncbi.nlm.nih.gov/35858748

Fields of Study

Genomics and Chromatin DynamicsRNA modifications and cancerRNA Research and Splicing0301 basic medicine03 medical and health sciences

MeSH Terms

Chromatin Immunoprecipitation SequencingBinding SitesChromatinHumansTranscription FactorsGenome, HumanSequence Analysis, DNATransposasesSilencer Elements, TranscriptionalHigh-Throughput Nucleotide Sequencing

Keywords

BiologyChromatinGenomeTranscription factorGeneticsHuman genomeComputational biologyGeneBinding SitesGenome, HumanSilencer Elements, TranscriptionalMethodHumansChromatin Immunoprecipitation SequencingTransposasesHigh-Throughput Nucleotide SequencingSequence Analysis, DNATranscription Factors

ATAC-STARR-seq reveals transcription factor–bound activators and silencers within chromatin-accessible regions of the human genome

FAIR Checklist

Authors (2)

Funding (5 grants)

Open Access

Topics

Annotations (Europe PMC)