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Challenges and considerations for reproducibility of STARR-seq assays

Genome Research(2023)10.1101/gr.277204.122Source: DataRank Database

Challenges and considerations for reproducibility of STARR-seq assays is a research paper published in Genome Research (2023). On theSindex it has a DataRank of 0. It has been cited 21 times.

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Open Access21 citations

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Enrichment:Funding (8 grants)OA: bronzeTopics (30)IDs (PubMed, PMC, OpenAlex)Annotations (1)

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Authors (5)

Ayaan Hossain ORCID,Deepro Banerjee ORCID,Craig A. Praul,Santhosh Girirajan ORCID,Maitreya Das ORCID

Live enrichment

PubMed:37130797 PMC:PMC10234304 OpenAlex:https://openalex.org/W4367673589

National Institutes of Health

Grant: R01-GM121907

National Institute of General Medical Sciences

Grant: R21-NS122398

NIGMS NIH HHS

Grant: R01 GM121907

NINDS NIH HHS

Grant: R21 NS122398

National Institutes of Health

Grant: 1R21NS122398-01

Cellular Basis for Genetic Susceptibility to Neurodevelopmental Disorders

National Institutes of Health

Grant: 5R01GM121907-03

Genomic basis of phenotypic variability of complex disorders

Huck Institutes of the Life Sciences

National Institute of Neurological Disorders and Stroke

bronzeLicense: cc-by-nc

journalhttps://genome.cshlp.org/content/33/4/479.full.pdf

publisherhttps://genome.cshlp.org/content/33/4/479.full.pdf

publisherhttps://syndication.highwire.org/content/doi/10.1101/gr.277204.122

journalhttps://doi.org/10.1101/gr.277204.122

repositoryhttps://pubmed.ncbi.nlm.nih.gov/37130797

Fields of Study

RNA and protein synthesis mechanismsGenomics and Phylogenetic StudiesAdvanced biosensing and bioanalysis techniques0301 basic medicine03 medical and health sciences0206 medical engineering02 engineering and technology

MeSH Terms

Regulatory Sequences, Nucleic AcidReproducibility of ResultsGenomeSequence Analysis, DNAComputational BiologyHigh-Throughput Nucleotide Sequencing

Keywords

Protocol (science)Computational biologyBiologyReproducibilityStandardizationConsistency (knowledge bases)PersonalizationComputer scienceStatisticsMathematicsArtificial intelligenceGenomePerspectiveReproducibility of ResultsHigh-Throughput Nucleotide SequencingSequence Analysis, DNARegulatory Sequences, Nucleic Acid

Challenges and considerations for reproducibility of STARR-seq assays

FAIR Checklist

Authors (5)

Funding (8 grants)

Open Access

Topics

Annotations (Europe PMC)