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Differences in molecular sampling and data processing explain variation among single-cell and single-nucleus RNA-seq experiments

Genome Research(2024)10.1101/gr.278253.123Source: DataRank Database

Differences in molecular sampling and data processing explain variation among single-cell and single-nucleus RNA-seq experiments is a research paper published in Genome Research (2024). On theSindex it has a DataRank of 0. It has been cited 13 times.

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Open Access13 citations

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Enrichment:Funding (3 grants)OA: bronzeTopics (39)IDs (PubMed, PMC, OpenAlex)Annotations (1)SDGs (1)

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Authors (4)

YOUNGHEE LEE ORCID,Gábor Marth ORCID,Aaron R. Quinlan ORCID,John Chamberlin ORCID

Live enrichment

PubMed:38355308 PMC:PMC10984380 OpenAlex:https://openalex.org/W4391805667

National Institutes of Health National Library of Medicine

Grant: 5T15LM007124

NLM NIH HHS

Grant: T15 LM007124

National Institutes of Health

Grant: 5T15LM007124-08

University of Utah Medical Informatics training

bronzeLicense: cc-by-nc

journalhttps://genome.cshlp.org/content/early/2024/02/14/gr.278253.123.full.pdf

publisherhttps://genome.cshlp.org/content/early/2024/02/14/gr.278253.123.full.pdf

publisherhttps://syndication.highwire.org/content/doi/10.1101/gr.278253.123

journalhttps://doi.org/10.1101/gr.278253.123

repositoryhttps://pubmed.ncbi.nlm.nih.gov/38355308

Fields of Study

Single-cell and spatial transcriptomicsExtracellular vesicles in diseaseCytomegalovirus and herpesvirus research0301 basic medicine0303 health sciences03 medical and health sciences

MeSH Terms

RNA-SeqAnimalsCell NucleusHumansRNA PrecursorsRNA, MessengerSequence Analysis, RNAGene Expression ProfilingMiceSingle-Cell Analysis

Keywords

BiologyVariation (astronomy)NucleusRNA-SeqSampling (signal processing)RNAGeneticsComputational biologyGene expressionTranscriptomeNeuroscienceGeneComputer scienceCell NucleusSequence Analysis, RNAResearchGene Expression ProfilingMiceRNA PrecursorsHumansAnimalsRNA, MessengerSingle-Cell Analysis

Sustainable Development Goals

SDG 0: Reduced inequalities

Differences in molecular sampling and data processing explain variation among single-cell and single-nucleus RNA-seq experiments

FAIR Checklist

Authors (4)

Funding (3 grants)

Open Access

Topics

Annotations (Europe PMC)