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Bayesian inference of sample-specific coexpression networks

Genome Research(2024)10.1101/gr.279117.124Source: DataRank Database

Bayesian inference of sample-specific coexpression networks is a research paper published in Genome Research (2024). On theSindex it has a DataRank of 0.446. It has been cited 12 times, with 7 citing works in its 1-hop citation network.

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0.446DataRank · unranked

Scored on demand from live citation data

Open Access12 citations · 7 citing works in its network

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›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (17 grants)OA: bronzeTopics (55)IDs (PubMed, PMC, OpenAlex)Annotations (2)SDGs (1)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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DataRank Breakdown

Base Score 86%Citation Network 14%

Base Score Contribution

0.385

From this paper's citation signal

Citation Network Contribution

0.0615

From 3 citing papers with measurable signal

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Top 5 citers driving the network score

Ranked by each citer's contribution to N(p) — log1p(C_q) divided by its reference count — out of 7 citers.

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Authors (9)

Viola Fanfani ORCID,Panagiotis Mandros,Marouen Ben Guebila ORCID,Jonas Fischer ORCID,Katherine H. Shutta ORCID

Live enrichment

PubMed:39134413 PMC:PMC11529861 OpenAlex:https://openalex.org/W4401503715

National Institutes of Health

Grant: R35CA220523

National Institutes of Health

Grant: U24CA231846

National Institutes of Health

Grant: P50CA127003

National Institutes of Health

Grant: R01HG011393

National Institutes of Health

Grant: P01HL114501

National Institutes of Health

Grant: K24HL171900

National Institutes of Health

Grant: T32HL007427

National Institutes of Health

Grant: K01HL166376

American Lung Association

Grant: LCD-821824

National Institutes of Health

Grant: 1K01HL166376-01

Sex chromosome gene regulatory networks and COPD

National Institutes of Health

Grant: 1U24CA231846-01A1

WebMeV: A Robust Platform for Intuitive Genomic Data Analysis

National Institutes of Health

Grant: 1K24HL171900-01

Mentoring in Patient Oriented Research in Lung Disease through a Sex and Gender Lens

National Institutes of Health

Grant: 5P01HL114501-02

Distinct and Overlapping Pathways of Fibrosis and Emphysema in Cigarette Smokers

National Institutes of Health

Grant: 5R01HG011393-04

Networks Tools to Understand Sex- and Gender-Specific Drivers of Disease

National Institutes of Health

Grant: 1R35CA220523-01A1

Unraveling the Complexities of Risk and Mechanism in Cancer

National Institutes of Health

Grant: 5P50CA127003-12

Dana Farber/ Harvard Cancer Center SPORE in Gastrointestinal Cancer

National Institutes of Health

Grant: 5T32HL007427-27

Clinical Epidemiology of Lung Diseases

bronzeLicense: CC BY

journalhttps://genome.cshlp.org/content/early/2024/08/10/gr.279117.124.full.pdf

publisherhttps://genome.cshlp.org/content/early/2024/08/10/gr.279117.124.full.pdf

publisherhttps://syndication.highwire.org/content/doi/10.1101/gr.279117.124

journalhttps://doi.org/10.1101/gr.279117.124

repositoryhttps://pubmed.ncbi.nlm.nih.gov/39134413

Fields of Study

Bioinformatics and Genomic NetworksGene expression and cancer classificationGene Regulatory Network Analysis0301 basic medicine0303 health sciences03 medical and health sciencesHumansGene Regulatory NetworksBayes TheoremBreast NeoplasmsFemaleMaleMicroRNAsGene Expression ProfilingRNA, MessengerSaccharomyces cerevisiaeTranscription FactorsAlgorithms

MeSH Terms

AlgorithmsBayes TheoremBreast NeoplasmsFemaleHumansMaleRNA, MessengerSaccharomyces cerevisiaeTranscription FactorsGene Expression ProfilingMicroRNAsGene Regulatory Networks

Keywords

BiologyInferenceComputational biologyPopulationGene regulatory networkBayesian inferenceBayesian probabilityGeneticsGeneGene expressionArtificial intelligenceComputer scienceMaleGene Expression ProfilingMethodBayes TheoremBreast NeoplasmsSaccharomyces cerevisiaeMicroRNAsHumansGene Regulatory NetworksFemaleRNA, MessengerAlgorithmsTranscription Factors

Sustainable Development Goals

SDG 0: Good health and well-being

Bayesian inference of sample-specific coexpression networks

FAIR Checklist

DataRank Breakdown

Top 5 citers driving the network score

Authors (9)

Funding (17 grants)

Open Access

Topics

Annotations (Europe PMC)