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Riemannian geometry and statistical modeling correct for batch effects and control false discoveries in single-cell surface protein count data

Physical review. E(2020)10.1103/physreve.102.012409Source: DataRank Database

Riemannian geometry and statistical modeling correct for batch effects and control false discoveries in single-cell surface protein count data is a research paper published in Physical review. E (2020). On theSindex it has a DataRank of 0. It has been cited 1 time.

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Open Access1 citations

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datarank_citation_only_1hop_v6· scope data_onlyMethodology

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Enrichment:Funding (4 grants)Impact (FWCI 0.07)OA: greenTopics (45)IDs (PubMed, PMC, OpenAlex)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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Authors (7)

Jacob R. Leistico,Christopher Cook ORCID,Yale Liu ORCID,Raymond J. Cho ORCID,Jeffrey B. Cheng ORCID

Live enrichment

PubMed:32794969 PMC:PMC7437020 OpenAlex:https://openalex.org/W3045754502

National Institutes of Health

Grant: K08AR067243

National Institutes of Health

Grant: R01CA163336

National Institutes of Health

Grant: 5K08AR067243-04

Role of DNA Methylation and Hydroxymethylation in Epidermal Homeostasis

National Institutes of Health

Grant: 5R01CA163336-02

Predicting Transcriptional and Epigenetic Networks in Cancer from Sequencing Data

FWCI

0.07

Citation Percentile

0.4%

Citation Trend

2020

greenLicense: APS Licenses for Journal Article Re-use

repositoryhttps://www.ncbi.nlm.nih.gov/pmc/articles/7437020

publisherhttps://link.aps.org/article/10.1103/PhysRevE.102.012409

publisherhttp://harvest.aps.org/v2/journals/articles/10.1103/PhysRevE.102.012409/fulltext

journalhttps://doi.org/10.1103/physreve.102.012409

Fields of Study

Single-cell and spatial transcriptomicsGene Regulatory Network AnalysisGene expression and cancer classification0301 basic medicine03 medical and health sciencesAnimalsFalse Positive ReactionsGene Expression ProfilingHumansMembrane ProteinsMiceModels, BiologicalSingle-Cell Analysis

MeSH Terms

AnimalsFalse Positive ReactionsHumansMembrane ProteinsModels, BiologicalGene Expression ProfilingMiceSingle-Cell Analysis

Keywords

Computer scienceSurface (topology)Information geometrySearch engine indexingRiemannian geometryNoise (video)Count dataComputational biologyAlgorithmBiologyBiological systemGeometryMathematicsArtificial intelligenceStatisticsImage (mathematics)MiceGene Expression ProfilingAnimalsHumansMembrane ProteinsFalse Positive ReactionsSingle-Cell AnalysisModels, Biological