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Characterization of a Y‐specific duplication/insertion of the anti‐Mullerian hormone type II receptor gene based on a chromosome‐scale genome assembly of yellow perch, Perca flavescens

Molecular Ecology Resources(2020)10.1111/1755-0998.13133Source: DataRank Database

Characterization of a Y‐specific duplication/insertion of the anti‐Mullerian hormone type II receptor gene based on a chromosome‐scale genome assembly of yellow perch, Perca flavescens is a research paper published in Molecular Ecology Resources (2020). On theSindex it has a DataRank of 2.3. It has been cited 125 times, with 91 citing works in its 1-hop citation network.

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2.3DataRank · unranked

Scored on demand from live citation data

Deposits data Open Access125 citations · 91 citing works in its network

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Repositories this paper deposited data in (declared in PubMed).

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›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (13 grants)Impact (FWCI 15.88)OA: greenTopics (82)Linked Datasets (20)DataCite Reuse (20)IDs (PubMed, PMC, OpenAlex)Annotations (3)SDGs (2)

FAIR Checklist

Context only (not used in score)

Findable (2/2)

Has DOI
Indexed in repositories

Accessible (1/2)

Open Access

Interoperable (2/2)

DataCite relations
Linked datasets

Reusable (0/3)

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DataRank Breakdown

Base Score 32%Citation Network 68%

Base Score Contribution

0.725

From this paper's citation signal

Citation Network Contribution

1.5

From 72 citing papers with measurable signal

Learn more about DataRank methodology →

Top 5 citers driving the network score

Ranked by each citer's contribution to N(p) — log1p(C_q) divided by its reference count — out of 91 citers.

SMARTdenovo: a de novo assembler using long noisy reads
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Identification of sex chromosome and sex-determining gene of southern catfish ( Silurus meridionalis ) based on XX, XY and YY genome sequencing
Proceedings of the Royal Society B Biological Sciences202236 citations50 referencesContributes 0.072
Seadragon genome analysis provides insights into its phenotype and sex determination locus
Science Advances202183 citations66 referencesContributes 0.067
A sex-linked SNP mutation in amhr2 is responsible for male differentiation in obscure puffer (Takifugu obscurus)
Molecular Biology Reports202116 citations47 referencesContributes 0.060
Identification of a candidate sex determination gene in Culaea inconstans suggests convergent recruitment of an Amh duplicate in two lineages of stickleback
Journal of Evolutionary Biology202239 citations63 referencesContributes 0.059

Authors (23)

Margot Zahm ORCID,Cédric Cabau ORCID,Christophe Klopp ORCID,Céline Lopez‐Roques ORCID,Olivier Bouchez ORCID

Live enrichment

PubMed:31903688 PMC:PMC7050324 OpenAlex:https://openalex.org/W2997940501

National Institutes of Health

Grant: R01 GM085318

Agence Nationale de la Recherche

Grant: ANR‐10‐INBS‐09

Agence Nationale de la Recherche

Grant: ANR‐13‐ISV7‐0005

Great Lakes Fishery Commission

Grant: 2018_CHR_44072

Agence Nationale de la Recherche

Grant: ANR-13-ISV7-0005

Agence Nationale de la Recherche

Grant: ANR-10-INBS-09

NIH HHS

Grant: R01 OD011116

NIGMS NIH HHS

Grant: R35 GM139635

National Institutes of Health

Grant: 5R01GM085318-03

Mechanisms of Sex Determination in Zebrafish

CRB-Anim "Centre de Ressources Biologiques pour les animaux domestiques"

FEAMP "Fonds européen pour les affaires maritimes et la pêche"

CRB-Anim "Centre de Ressources Biologiques pour les animaux domestiques"

FEAMP "Fonds européen pour les affaires maritimes et la pêche"

FWCI

15.88

Citation Percentile

1.0%

Citation Trend

2020

2021

2022

2023

2024

2025

2026

greenLicense: other-oa

repositoryhttps://hal.inrae.fr/hal-02623895v1/file/main.pdf

GREENhttps://hal.inrae.fr/hal-02623895v1/file/main.pdf

repositoryhttps://hal.inrae.fr/hal-02623895v1/file/main.pdf

publisherhttps://api.wiley.com/onlinelibrary/tdm/v1/articles/10.1111%2F1755-0998.13133

publisherhttps://onlinelibrary.wiley.com/doi/pdf/10.1111/1755-0998.13133

Fields of Study

Genetic and Clinical Aspects of Sex Determination and Chromosomal AbnormalitiesReproductive biology and impacts on aquatic speciesAquaculture disease management and microbiotaMedicineBiologyEnvironmental Science04 agricultural and veterinary sciences0401 agriculture, forestry, and fisheriesAnimalsCanadaFemaleFish ProteinsGene DuplicationGenomeGenomicsMaleMutagenesis, InsertionalPerchesPhylogenyReceptors, PeptideReceptors, Transforming Growth Factor betaUnited StatesX ChromosomeY Chromosome

MeSH Terms

AnimalsCanadaFemaleMalePerchesPhylogenyUnited StatesX ChromosomeY ChromosomeMutagenesis, InsertionalGenomeReceptors, PeptideReceptors, Transforming Growth Factor betaGene DuplicationGenomicsFish Proteins

Keywords

PerchBiologyGenomeGeneticsChromosomeGene duplicationGenomicsAquacultureGeneFisheryTransforming growth factor betaSex-determinationYellow PerchWhole Genome SequencingAmhr2Long-reads SequencingFish ProteinsMale570CanadaX ChromosomeReceptors, Peptide[SDV]Life Sciences [q-bio][SDV.GEN] Life Sciences [q-bio]/Genetics[SDV.GEN.GA] Life Sciences [q-bio]/Genetics/Animal genetics[INFO] Computer Science [cs]630sex-determiningY ChromosomeAnimals[INFO]Computer Science [cs]Ecology, Evolution, Behavior and SystematicsPhylogeny[SDV.GEN]Life Sciences [q-bio]/GeneticsUnited States[SDV] Life Sciences [q-bio][SDV.GEN.GA]Life Sciences [q-bio]/Genetics/Animal geneticsMutagenesis, InsertionalPerchesFemaleReceptors, Transforming Growth Factor betaBiotechnology

Sustainable Development Goals

SDG 14: 14. Life underwaterSDG 0: Life below water

Additional file 10 of Telomere-to-telomere assembly of a fish Y chromosome reveals the origin of a young sex chromosome pair

10.6084/m9.figshare.14966150.v1figshare

Additional file 10 of Telomere-to-telomere assembly of a fish Y chromosome reveals the origin of a young sex chromosome pair

10.6084/m9.figshare.14966150figshare

Additional file 1 of Telomere-to-telomere assembly of a fish Y chromosome reveals the origin of a young sex chromosome pair

10.6084/m9.figshare.14966156.v1figshare

Additional file 1 of Telomere-to-telomere assembly of a fish Y chromosome reveals the origin of a young sex chromosome pair

10.6084/m9.figshare.14966156figshare

Additional file 6 of Telomere-to-telomere assembly of a fish Y chromosome reveals the origin of a young sex chromosome pair

10.6084/m9.figshare.14966174figshare

Additional file 5 of Telomere-to-telomere assembly of a fish Y chromosome reveals the origin of a young sex chromosome pair

10.6084/m9.figshare.14966171figshare

Additional file 4 of Telomere-to-telomere assembly of a fish Y chromosome reveals the origin of a young sex chromosome pair

10.6084/m9.figshare.14966168.v1figshare

Additional file 5 of Telomere-to-telomere assembly of a fish Y chromosome reveals the origin of a young sex chromosome pair

10.6084/m9.figshare.14966171.v1figshare

Additional file 4 of Telomere-to-telomere assembly of a fish Y chromosome reveals the origin of a young sex chromosome pair

10.6084/m9.figshare.14966168figshare

Additional file 3 of Telomere-to-telomere assembly of a fish Y chromosome reveals the origin of a young sex chromosome pair

10.6084/m9.figshare.14966165.v1figshare

Additional file 6 of Telomere-to-telomere assembly of a fish Y chromosome reveals the origin of a young sex chromosome pair

10.6084/m9.figshare.14966174.v1figshare

Additional file 7 of Telomere-to-telomere assembly of a fish Y chromosome reveals the origin of a young sex chromosome pair

10.6084/m9.figshare.14966177.v1figshare

Additional file 8 of Telomere-to-telomere assembly of a fish Y chromosome reveals the origin of a young sex chromosome pair

10.6084/m9.figshare.14966180.v1figshare

Additional file 8 of Telomere-to-telomere assembly of a fish Y chromosome reveals the origin of a young sex chromosome pair

10.6084/m9.figshare.14966180figshare

Additional file 7 of Telomere-to-telomere assembly of a fish Y chromosome reveals the origin of a young sex chromosome pair

10.6084/m9.figshare.14966177figshare

Additional file 9 of Telomere-to-telomere assembly of a fish Y chromosome reveals the origin of a young sex chromosome pair

10.6084/m9.figshare.14966183.v1figshare

Additional file 2 of Telomere-to-telomere assembly of a fish Y chromosome reveals the origin of a young sex chromosome pair

10.6084/m9.figshare.14966159figshare

Additional file 2 of Telomere-to-telomere assembly of a fish Y chromosome reveals the origin of a young sex chromosome pair

10.6084/m9.figshare.14966159.v1figshare

Additional file 9 of Telomere-to-telomere assembly of a fish Y chromosome reveals the origin of a young sex chromosome pair

10.6084/m9.figshare.14966183figshare

Additional file 3 of Telomere-to-telomere assembly of a fish Y chromosome reveals the origin of a young sex chromosome pair

10.6084/m9.figshare.14966165figshare

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Characterization of a Y‐specific duplication/insertion of the anti‐Mullerian hormone type II receptor gene based on a chromosome‐scale genome assembly of yellow perch, Perca flavescens

FAIR Checklist

DataRank Breakdown

Top 5 citers driving the network score

Authors (23)

Funding (13 grants)

Impact

Open Access

Topics

Linked Datasets (20)

Annotations (Europe PMC)

Related Papers (6)