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The genetics of aerotolerant growth in an alphaproteobacterium with a naturally reduced genome

mBio(2023)10.1128/mbio.01487-23Source: DataRank Database

The genetics of aerotolerant growth in an alphaproteobacterium with a naturally reduced genome is a research paper published in mBio (2023). On theSindex it has a DataRank of 0.539. It has been cited 19 times, with 9 citing works in its 1-hop citation network.

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0.539DataRank · unranked

Scored on demand from live citation data

Deposits data Open Access19 citations · 9 citing works in its network

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Data availability

Repositories this paper deposited data in (declared in PubMed).

BioProjectPRJNA1018248

DataRank reads this dataset's downstream impact straight off the citation graph — no black box, no proprietary weighting. How is this computed?

›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (6 grants)Topics (18)Linked Datasets (14)DataCite Reuse (14)IDs (PubMed, PMC)Annotations (1)

FAIR Checklist

Context only (not used in score)

Findable (2/2)

Has DOI
Indexed in repositories

Accessible (1/2)

Open Access

Interoperable (2/2)

DataCite relations
Linked datasets

Reusable (0/3)

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DataRank Breakdown

Base Score 83%Citation Network 17%

Base Score Contribution

0.449

From this paper's citation signal

Citation Network Contribution

0.0899

From 5 citing papers with measurable signal

Learn more about DataRank methodology →

Top 5 citers driving the network score

Ranked by each citer's contribution to N(p) — log1p(C_q) divided by its reference count — out of 9 citers.

pH adjustment increases biofuel production from inhibitory switchgrass hydrolysates
Bioresource Technology20256 citations55 referencesContributes 0.035
pH adjustment increases biofuel production from inhibitory switchgrass hydrolysates
bioRxiv (Cold Spring Harbor Laboratory)20253 citations40 referencesContributes 0.035
Peptidoglycan remodeling improves salt resilience of Zymomonas mobilis
Applied and Environmental Microbiology20261 citations46 referencesContributes 0.015
CRISPR-Based Regulation for High-Throughput Screening
ACS Synthetic Biology20254 citations152 referencesContributes 0.011
The rise and future of CRISPR-based approaches for high-throughput genomics
FEMS Microbiology Reviews202431 citations344 referencesContributes 0.010

Authors (9)

Amy B. Banta ORCID,Ryan D. Ward ORCID,Julio Rivera Vazquez,Magdalena M. Felczak ORCID,Michael B. Wolfe ORCID

Live enrichment

PubMed:37905909 PMC:PMC10746277

NIGMS NIH HHS

Grant: T32 GM007133

NIH Biotechnology Training Program

Grant: NIH 5T32GM135066

NIGMS NIH HHS

Grant: T32 GM135066

DOE | Great Lakes Bioenergy Research Center

Grant: DE-SC0018409

NSF Graduate Research Fellowship Program

Grant: DGE-1747503

Predoctoral Training Program in Genetics

Grant: NIH 5T32GM007133

MeSH Terms

ZymomonasOxygenGenome, Bacterial

Keywords

DNA repairMembrane potentialOxidative stressATP synthaseComparative genomicsZymomonas mobilisMetabolomicsanaerobic respirationGenome ReductionEssential GenesAlphaproteobacteriaCrispr-cas9Rnf ComplexMismatch-crispriMobile-crispri

Additional file 7 of Lipid membrane remodeling and metabolic response during isobutanol and ethanol exposure in Zymomonas mobilis

10.6084/m9.figshare.26673741.v1figshare

Additional file 6 of Lipid membrane remodeling and metabolic response during isobutanol and ethanol exposure in Zymomonas mobilis

10.6084/m9.figshare.26673732figshare

Additional file 6 of Lipid membrane remodeling and metabolic response during isobutanol and ethanol exposure in Zymomonas mobilis

10.6084/m9.figshare.26673732.v1figshare

Additional file 7 of Lipid membrane remodeling and metabolic response during isobutanol and ethanol exposure in Zymomonas mobilis

10.6084/m9.figshare.26673741figshare

Additional file 3 of Lipid membrane remodeling and metabolic response during isobutanol and ethanol exposure in Zymomonas mobilis

10.6084/m9.figshare.26673717figshare

Additional file 4 of Lipid membrane remodeling and metabolic response during isobutanol and ethanol exposure in Zymomonas mobilis

10.6084/m9.figshare.26673720.v1figshare

Additional file 5 of Lipid membrane remodeling and metabolic response during isobutanol and ethanol exposure in Zymomonas mobilis

10.6084/m9.figshare.26673723figshare

Additional file 3 of Lipid membrane remodeling and metabolic response during isobutanol and ethanol exposure in Zymomonas mobilis

10.6084/m9.figshare.26673717.v1figshare

Additional file 2 of Lipid membrane remodeling and metabolic response during isobutanol and ethanol exposure in Zymomonas mobilis

10.6084/m9.figshare.26673714figshare

Additional file 4 of Lipid membrane remodeling and metabolic response during isobutanol and ethanol exposure in Zymomonas mobilis

10.6084/m9.figshare.26673720figshare

Additional file 5 of Lipid membrane remodeling and metabolic response during isobutanol and ethanol exposure in Zymomonas mobilis

10.6084/m9.figshare.26673723.v1figshare

Additional file 1 of Lipid membrane remodeling and metabolic response during isobutanol and ethanol exposure in Zymomonas mobilis

10.6084/m9.figshare.26673711figshare

Additional file 1 of Lipid membrane remodeling and metabolic response during isobutanol and ethanol exposure in Zymomonas mobilis

10.6084/m9.figshare.26673711.v1figshare

Additional file 2 of Lipid membrane remodeling and metabolic response during isobutanol and ethanol exposure in Zymomonas mobilis

10.6084/m9.figshare.26673714.v1figshare

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The genetics of aerotolerant growth in an alphaproteobacterium with a naturally reduced genome

FAIR Checklist

DataRank Breakdown

Top 5 citers driving the network score

Authors (9)

Funding (6 grants)

Topics

Linked Datasets (14)

Annotations (Europe PMC)

Related Papers (10)