The complete genome sequence of probiotic Lactobacillus acidophilus ATCC 9224 isolated from sour milk is a dataset published in Microbiology Resource Announcements (2024). On theSindex it has a DataRank of 0.110, placing it in the top 72.3% of the data-sharing corpus. It has been cited 1 time, with 1 citing works in its 1-hop citation network. Its calibrated FAIR score is 38/100.
Ranks in the top 72% for downstream scientific impact
DataRank reads this dataset's downstream impact straight off the citation graph — no black box, no proprietary weighting. How is this computed?
FAIR checklist signals are shown for context only and do not affect DataRank scoring.
Full FAIR picture · advisory
The headline score is computed from the scored criteria — the fact-shaped checks (a repository, an accession, a licence) that two independent models agree on. The advisory criteria below are real FAIR guidance but rest on judgment calls that models read differently, so they inform without moving the number.
“The complete genome sequence and annotation are deposited in the GenBank database with accession number CP130437.”— not found in the paper; verdict downgraded
The paper provides a GenBank accession (CP130437), which is a persistent identifier scheme. [downgraded to 'partial' — no verifiable quote from the paper] [majority verdict 'partial' (3/5 passes agreed)]
RDA-F1-01D — FAIR Data Maturity Model: 'Data is identified by a persistent identifier' (priorit · RDA-F1-02D — FAIR Data Maturity Model: 'Data is identified by a globally unique identifier' · FsF-F1-02D — F-UJI/FAIRsFAIR: 'Data is assigned a persistent identifier'
“GenBank”
GenBank is a well-known data repository for genomic sequences. [majority verdict 'yes' (3/5 passes agreed)]
RDA-F4-01M — FAIR Data Maturity Model: metadata is offered so it can be harvested and indexed ( · NIH DMS Policy Element 4 (NOT-OD-21-014) — name the repository where data will be archived · NSTC Desirable Characteristics of Data Repositories (2022) — 'Long-Term Sustainability', 'Reten
“The complete genome sequence and annotation are deposited in the GenBank database with accession number CP130437.”— not found in the paper; verdict downgraded
The dataset identifier (CP130437) appears only in the body text (data-availability statement), not in the reference list. [downgraded to 'no' — no verifiable quote from the paper]
FORCE11 Joint Declaration of Data Citation Principles (2014) — data should be cited as a first- · RDA-F3-01M — metadata clearly and explicitly includes the identifier of the data it describes · FsF-F3-01M — F-UJI: 'Metadata includes the identifier of the data it describes'
Advisory · not in the published score
“The complete genome sequence and annotation are deposited in the GenBank database with accession number CP130437. Its associated Bioproject and BioSample are PRJNA992063 and SAMN36338928, respectively.”— not found in the paper; verdict downgraded
The data-availability statement points to a repository record with accession numbers (Colavizza category 3). [downgraded to 'partial' — no verifiable quote from the paper]
Colavizza, Hrynaszkiewicz, Staden, Whitaker & McGillivray (2020), 'The citation advantage of li · Springer Nature research data policy — Data Availability Statements: standard statement templat · RDA-F3-01M — metadata clearly and explicitly includes the identifier of the data it describes
“The resulting genome was assembled into a single contig of 2,035,536 bp with a GC% of 34.76.”
The dataset content is described only in running prose (no itemised inventory section, table, or list).
RDA-F2-01M — 'Rich metadata is provided to allow discovery' (priority Essential) · FsF-F2-01M — F-UJI: 'Metadata includes descriptive core elements to support data findability' · FsF-R1-01MD — F-UJI: 'Metadata specifies the content of the data'
“The complete genome sequence and annotation are deposited in the GenBank database with accession number CP130437.”— not found in the paper; verdict downgraded
The data are deposited in a public repository (GenBank) with no stated precondition (embargo, registration, or application). [downgraded to 'partial' — no verifiable quote from the paper]
RDA-A1.1-01D — 'Data is accessible through a free access protocol' · FsF-A1-01M — F-UJI: 'Metadata contains access level and access conditions of the data' · NSTC Desirable Characteristics of Data Repositories (2022) — 'Free and Easy Access'
Advisory · not in the published score
“The complete genome sequence and annotation are deposited in the GenBank database with accession number CP130437.”— not found in the paper; verdict downgraded
The paper describes the action of depositing the data in GenBank, which implies open access, but does not explicitly label the access level. [downgraded to 'no' — no verifiable quote from the paper]
FsF-A1-01M — F-UJI: 'Metadata contains access level and access conditions of the data' · RDA-A1-01M — metadata contains information to enable the user to get access to the data · COAR Controlled Vocabularies — Access Rights v1.0 (open / embargoed / restricted / metadata-onl
The data are a bacterial genome sequence, not human-subject or sensitive; no gatekeeper is named.
NIH Genomic Data Sharing Policy (NOT-OD-14-124) — controlled-access via a Data Access Committee · RDA-A1.2-01D — 'Data is accessible through an access protocol that supports authentication and · NIH DMS Policy Element 5 (NOT-OD-21-014) — Access, Distribution, or Reuse Considerations (conse
“The complete genome sequence and annotation are deposited in the GenBank database with accession number CP130437.”— not found in the paper; verdict downgraded
The statement indicates the data are available now (deposited) but does not specify how long they will persist. [downgraded to 'no' — no verifiable quote from the paper]
NIH DMS Plan Element 4 (NOT-OD-21-014) — Data Preservation, Access, and Associated Timelines · NSTC Desirable Characteristics (2022), Organizational Infrastructure: 'Retention Policy' · RDA-A2-01M — 'Metadata is guaranteed to remain available after data is no longer available'
No file format token (open or proprietary) is named for the released data.
FsF-R1.3-02D — F-UJI: 'Data is available in a file format recommended by the target research co · RDA-R1.3-02D — data is expressed in a machine-understandable community standard · RDA-I1-01D — data uses a knowledge representation expressed in a standardised format
Advisory · not in the published score
No community standard checklist, ontology, or metadata schema is named for the data.
RDA-R1.3-01M — 'Metadata complies with a community standard' (priority Essential) · RDA-R1.3-01D — 'Data complies with a community standard' · RDA-I2-01M — '(Meta)data use vocabularies that follow FAIR principles'
No identifier for an external resource (source dataset, reference genome, database, or code) is provided. [majority verdict 'no' (4/5 passes agreed)]
RDA-I3-01M — '(meta)data include references to other (meta)data' · RDA-I3-03M — 'metadata includes qualified references to other metadata' · FsF-I3-01M — F-UJI: 'Metadata includes links between the data and its related entities'
No licence for the data is named; the copyright statement applies to the article, not the data.
RDA-R1.1-01M — 'Metadata includes information about the licence under which the data can be reu · RDA-R1.1-02M — 'Metadata refers to a standard reuse licence' · RDA-R1.1-03M — 'Metadata refers to a machine-understandable reuse licence'
No version token or date is provided to identify the snapshot of the data. [majority verdict 'no' (4/5 passes agreed)]
DataCite Metadata Schema 4.6 — the 'Version' property · RDA-R1.2-01M — provenance information (which version was used is provenance) · NSTC Desirable Characteristics of Data Repositories (2022) — 'Provenance', 'Retention Policy'
The study's own code is not mentioned; no locator is provided.
NIH DMS Policy Element 2 (NOT-OD-21-014) — 'Related Tools, Software and/or Code' · FAIR4RS Principles v1.0 (Chue Hong et al., 2022; RDA/FORCE11/ReSA) — FAIR Principles for Resear · FORCE11 Software Citation Principles (Smith, Katz & Niemeyer, 2016, PeerJ CS 2:e86)
“R01DK121073”
The paper includes specific grant numbers (e.g., R01DK121073) from named funders.
DataCite Metadata Schema 4.6 — 'FundingReference' property (funderName, funderIdentifier, award · Crossref Funder Registry — canonical funder identifiers for funding metadata · RDA-F2-01M — rich metadata provided to allow discovery (funding is part of the descriptive reco
Advisory · not in the published score
“The genome was sequenced on a PacBio RSII DNA sequencer (PacBio, USA)”
The paper names specific instruments, kits, and software versions used to produce the data.
RDA-R1.2-01M — 'Metadata includes provenance information according to community- specific standa · FsF-R1.2-01M — F-UJI: 'Metadata includes provenance information about data creation or generati · W3C PROV-O (W3C Recommendation, 2013) — the entity/activity/agent model of provenance
“The resulting genome was assembled into a single contig of 2,035,536 bp with a GC% of 34.76. Of total base pairs in contig, 618,874 and 1,416,662 bp were classified and un- classified, respectively. The genome contained 1,930 coding sequences (CDS), including 1,030 functional, 819 hypothetical, and 80 putative CDS. It also possessed 18 rRNA and 63 tRNA genes, and 1 ATP-binding cassette antibiotic efflux pump bcrA gene.”
Variable definitions are provided in the article text, not in a separate documentation file shipped with the data. [majority verdict 'partial' (3/5 passes agreed)]
RDA-R1-01M — '(Meta)data are richly described with a plurality of accurate and relevant attribu · FsF-R1-01MD — F-UJI: 'Metadata specifies the content of the data' · NIH DMS Policy Element 3 (NOT-OD-21-014) — Standards (documentation and metadata to accompany t
Calibrated FAIR score — a parallel quality metric, independent of the DataRank citation score. See the full evaluation →
Base Score Contribution
0.104
From this paper's citation signal
Citation Network Contribution
6.23 × 10⁻³
From 1 citing papers with measurable signal
Ranked by each citer's contribution to N(p) — log1p(Cq) divided by its reference count — out of 1 citer.
HHS | NIH | National Institute of Diabetes and Digestive and Kidney Diseases
Grant: R01DK121073
HHS | NIH | National Institute of Diabetes and Digestive and Kidney Diseases
Grant: R01DK106072
DOE | NNSA | Los Alamos National Laboratory
Grant: 20160340ER
DOE | NNSA | Los Alamos National Laboratory
Grant: 20170671PRD2
National Institutes of Health
Grant: 5R01DK106072-05
Bifidobacterium bifidum modulation of intestinal barrier and intestinal inflammation
National Institutes of Health
Grant: 5R01DK121073-04
Intestinal Barrier, Probiotic Bacteria, and the Gut-Liver Axis
FWCI
0.25
Citation Percentile
0.5%
Citation Trend
Fields of Study
Keywords
Sustainable Development Goals