Complete genome sequence of Stenotrophomonas maltophilia complex strain STEN00241 is a dataset published in Microbiology Resource Announcements (2023). On theSindex it has a DataRank of 0.241, placing it in the top 61.3% of the data-sharing corpus. It has been cited 4 times. Its calibrated FAIR score is 42/100.
Ranks in the top 61% for downstream scientific impact
Linked data & code
DataRank reads this dataset's downstream impact straight off the citation graph — no black box, no proprietary weighting. How is this computed?
FAIR checklist signals are shown for context only and do not affect DataRank scoring.
Full FAIR picture · advisory
The headline score is computed from the scored criteria — the fact-shaped checks (a repository, an accession, a licence) that two independent models agree on. The advisory criteria below are real FAIR guidance but rest on judgment calls that models read differently, so they inform without moving the number.
“The genome sequence of S. maltophilia complex STEN00241 has been deposited at the National Center for Biotechnology Information (NCBI) with the assembly accession number CP136247 .”
The paper assigns a persistent identifier (CP136247, a GenBank assembly accession) to the dataset. [majority verdict 'yes' (4/5 passes agreed)]
RDA-F1-01D — FAIR Data Maturity Model: 'Data is identified by a persistent identifier' (priorit · RDA-F1-02D — FAIR Data Maturity Model: 'Data is identified by a globally unique identifier' · FsF-F1-02D — F-UJI/FAIRsFAIR: 'Data is assigned a persistent identifier'
“The genome sequence of S. maltophilia complex STEN00241 has been deposited at the National Center for Biotechnology Information (NCBI) .”— not found in the paper; verdict downgraded
The paper names NCBI, which is a curated data repository listed in re3data. [downgraded to 'partial' — no verifiable quote from the paper] [majority verdict 'partial' (3/5 passes agreed)]
RDA-F4-01M — FAIR Data Maturity Model: metadata is offered so it can be harvested and indexed ( · NIH DMS Policy Element 4 (NOT-OD-21-014) — name the repository where data will be archived · NSTC Desirable Characteristics of Data Repositories (2022) — 'Long-Term Sustainability', 'Reten
“The genome sequence of S. maltophilia complex STEN00241 has been deposited at the National Center for Biotechnology Information (NCBI) with the assembly accession number CP136247 . The BioProject accession number is PRJNA1023947 , and the BioSample accession number is SAMN37685180 . The raw Oxford Nanopore reads are available under the accession number SRR26361329 .”
The dataset identifier appears only in the body text (DATA AVAILABILITY section), not as a reference-list entry. [majority verdict 'partial' (3/5 passes agreed)]
FORCE11 Joint Declaration of Data Citation Principles (2014) — data should be cited as a first- · RDA-F3-01M — metadata clearly and explicitly includes the identifier of the data it describes · FsF-F3-01M — F-UJI: 'Metadata includes the identifier of the data it describes'
Advisory · not in the published score
“The genome sequence of S. maltophilia complex STEN00241 has been deposited at the National Center for Biotechnology Information (NCBI) with the assembly accession number CP136247 . The BioProject accession number is PRJNA1023947 , and the BioSample accession number is SAMN37685180 . The raw Oxford Nanopore reads are available under the accession number SRR26361329 .”
The data-availability statement points to a repository record with accessions (Colavizza category 3). [majority verdict 'yes' (4/5 passes agreed)]
Colavizza, Hrynaszkiewicz, Staden, Whitaker & McGillivray (2020), 'The citation advantage of li · Springer Nature research data policy — Data Availability Statements: standard statement templat · RDA-F3-01M — metadata clearly and explicitly includes the identifier of the data it describes
“The STEN00241 genome has 4,751,329 nucleotides (66.5% GC content) and 4,340 predicted genes.”
The dataset's content is described in running prose (size and number of features), but no itemized inventory (table, section, list) is provided.
RDA-F2-01M — 'Rich metadata is provided to allow discovery' (priority Essential) · FsF-F2-01M — F-UJI: 'Metadata includes descriptive core elements to support data findability' · FsF-R1-01MD — F-UJI: 'Metadata specifies the content of the data'
“The raw Oxford Nanopore reads are available under the accession number SRR26361329.”— not found in the paper; verdict downgraded
The text gives a route to the data with no stated precondition; the repository is publicly accessible. [downgraded to 'partial' — no verifiable quote from the paper] [majority verdict 'partial' (3/5 passes agreed)]
RDA-A1.1-01D — 'Data is accessible through a free access protocol' · FsF-A1-01M — F-UJI: 'Metadata contains access level and access conditions of the data' · NSTC Desirable Characteristics of Data Repositories (2022) — 'Free and Easy Access'
Advisory · not in the published score
The paper does not explicitly label the access level of the data (e.g., 'open access'). It only states that the data have been deposited at NCBI, which implies availability but not a stated access level. [downgraded to 'no' — no verifiable quote from the paper] [majority verdict 'no' (4/5 passes agreed)]
FsF-A1-01M — F-UJI: 'Metadata contains access level and access conditions of the data' · RDA-A1-01M — metadata contains information to enable the user to get access to the data · COAR Controlled Vocabularies — Access Rights v1.0 (open / embargoed / restricted / metadata-onl
The data are a bacterial genome sequence, not human-subject data, and no gatekeeper of any kind is named.
NIH Genomic Data Sharing Policy (NOT-OD-14-124) — controlled-access via a Data Access Committee · RDA-A1.2-01D — 'Data is accessible through an access protocol that supports authentication and · NIH DMS Policy Element 5 (NOT-OD-21-014) — Access, Distribution, or Reuse Considerations (conse
The paper contains no statement about when the data become available (beyond 'available now') or how long they persist.
NIH DMS Plan Element 4 (NOT-OD-21-014) — Data Preservation, Access, and Associated Timelines · NSTC Desirable Characteristics (2022), Organizational Infrastructure: 'Retention Policy' · RDA-A2-01M — 'Metadata is guaranteed to remain available after data is no longer available'
No file format for the released data is named anywhere in the text.
FsF-R1.3-02D — F-UJI: 'Data is available in a file format recommended by the target research co · RDA-R1.3-02D — data is expressed in a machine-understandable community standard · RDA-I1-01D — data uses a knowledge representation expressed in a standardised format
Advisory · not in the published score
The paper does not name any community-standard data or metadata checklist, schema, or ontology applied to the data.
RDA-R1.3-01M — 'Metadata complies with a community standard' (priority Essential) · RDA-R1.3-01D — 'Data complies with a community standard' · RDA-I2-01M — '(Meta)data use vocabularies that follow FAIR principles'
“Polished using Medaka (v.1.6.1) ( https://github.com/nanoporetech/medaka ) and with Illumina reads ( SRR13733231 ) ( 5 ) using Pilon (v.1.24) ( 12 ).”
The paper cites an external resource (Illumina reads SRR13733231) by its identifier, meeting the criterion. [majority verdict 'yes' (3/5 passes agreed)]
RDA-I3-01M — '(meta)data include references to other (meta)data' · RDA-I3-03M — 'metadata includes qualified references to other metadata' · FsF-I3-01M — F-UJI: 'Metadata includes links between the data and its related entities'
The paper does not attach any license to the data; the CC BY 4.0 license applies only to the article.
RDA-R1.1-01M — 'Metadata includes information about the licence under which the data can be reu · RDA-R1.1-02M — 'Metadata refers to a standard reuse licence' · RDA-R1.1-03M — 'Metadata refers to a machine-understandable reuse licence'
The paper does not provide a version token or date to identify a specific snapshot of the data. [majority verdict 'no' (4/5 passes agreed)]
DataCite Metadata Schema 4.6 — the 'Version' property · RDA-R1.2-01M — provenance information (which version was used is provenance) · NSTC Desirable Characteristics of Data Repositories (2022) — 'Provenance', 'Retention Policy'
The paper does not provide a locator for any custom code; only third-party tools are mentioned.
NIH DMS Policy Element 2 (NOT-OD-21-014) — 'Related Tools, Software and/or Code' · FAIR4RS Principles v1.0 (Chue Hong et al., 2022; RDA/FORCE11/ReSA) — FAIR Principles for Resear · FORCE11 Software Citation Principles (Smith, Katz & Niemeyer, 2016, PeerJ CS 2:e86)
“This work was also supported by NIH grant R21-AI48847 to J.B.G. and R01-AI27472 to D.V.T.”
The paper provides specific grant numbers for the funding.
DataCite Metadata Schema 4.6 — 'FundingReference' property (funderName, funderIdentifier, award · Crossref Funder Registry — canonical funder identifiers for funding metadata · RDA-F2-01M — rich metadata provided to allow discovery (funding is part of the descriptive reco
Advisory · not in the published score
“Genomic DNA was purified using the Promega Wizard HMW DNA Extraction Kit (following the manufacturer’s instructions) and sequenced at SeqCenter (Pittsburgh, PA, USA) on a MinION (FLO-MIN106) flowcell with R9.4.1 chemistry.”
The paper names specific instruments and kits used to produce the data.
RDA-R1.2-01M — 'Metadata includes provenance information according to community- specific standa · FsF-R1.2-01M — F-UJI: 'Metadata includes provenance information about data creation or generati · W3C PROV-O (W3C Recommendation, 2013) — the entity/activity/agent model of provenance
No documentation object (README, data dictionary, codebook) is mentioned as accompanying the deposited data. [majority verdict 'no' (4/5 passes agreed)]
RDA-R1-01M — '(Meta)data are richly described with a plurality of accurate and relevant attribu · FsF-R1-01MD — F-UJI: 'Metadata specifies the content of the data' · NIH DMS Policy Element 3 (NOT-OD-21-014) — Standards (documentation and metadata to accompany t
Calibrated FAIR score — a parallel quality metric, independent of the DataRank citation score. See the full evaluation →
Base Score Contribution
0.241
From this paper's citation signal
Citation Network Contribution
0
Citation network not refreshed for this result
This paper's DataRank is currently driven only by its base citation score. Citation network data was not refreshed for this result.
Learn more about DataRank methodology →HHS | National Institutes of Health
Grant: R21 AI48847
HHS | National Institutes of Health
Grant: R01 AI27472
HHS | National Institutes of Health
Grant: IRACDA
Cystic Fibrosis Foundation
Grant: GOLDBE19P0
Cystic Fibrosis Foundation
Grant: WHITEL20A0
Cystic Fibrosis Foundation
Grant: CRISAN22F0
NIA NIH HHS
Grant: R01 AG027472
NIAID NIH HHS
Grant: R01 AI048847
National Institutes of Health
Grant: 5R01AI048847-04
REGULATORY MECHANISMS IN TYPE I DIABETES
National Institutes of Health
Grant: 5R01HL027472-07
GLOBAL AND REGIONAL CARDIAC METABOLISM: NMR STUDIES
FWCI
0.89
Citation Percentile
0.7%
Citation Trend
Fields of Study
Keywords