Metagenome-assembled genome sequences of two cyanobacterial cultures from Homa Bay County, Kenya is a dataset published in Microbiology Resource Announcements (2024). On theSindex it has a DataRank of 0.253, placing it in the top 59.6% of the data-sharing corpus. It has been cited 4 times, with 2 citing works in its 1-hop citation network. Its calibrated FAIR score is 63/100.
Ranks in the top 60% for downstream scientific impact
Linked data & code
DataRank reads this dataset's downstream impact straight off the citation graph — no black box, no proprietary weighting. How is this computed?
FAIR checklist signals are shown for context only and do not affect DataRank scoring.
Full FAIR picture · advisory
The headline score is computed from the scored criteria — the fact-shaped checks (a repository, an accession, a licence) that two independent models agree on. The advisory criteria below are real FAIR guidance but rest on judgment calls that models read differently, so they inform without moving the number.
“The metagenome-assembled genomes have been deposited in GenBank under the accession numbers JAVSPN000000000 and JAVSPO000000000 for WG22 and LS22, respectively.”
The paper provides GenBank accession numbers (JAVSPN000000000, JAVSPO000000000), which are persistent identifiers in a recognized scheme.
RDA-F1-01D — FAIR Data Maturity Model: 'Data is identified by a persistent identifier' (priorit · RDA-F1-02D — FAIR Data Maturity Model: 'Data is identified by a globally unique identifier' · FsF-F1-02D — F-UJI/FAIRsFAIR: 'Data is assigned a persistent identifier'
“The metagenome-assembled genomes have been deposited in GenBank under the accession numbers JAVSPN000000000 and JAVSPO000000000 for WG22 and LS22, respectively.”
GenBank is a named data repository (a curated archive that issues accessions and commits to retention).
RDA-F4-01M — FAIR Data Maturity Model: metadata is offered so it can be harvested and indexed ( · NIH DMS Policy Element 4 (NOT-OD-21-014) — name the repository where data will be archived · NSTC Desirable Characteristics of Data Repositories (2022) — 'Long-Term Sustainability', 'Reten
“The metagenome-assembled genomes have been deposited in GenBank under the accession numbers JAVSPN000000000 and JAVSPO000000000 for WG22 and LS22, respectively.”
The dataset identifier appears only in the body text (data-availability statement) and not as a reference-list entry. [majority verdict 'partial' (4/5 passes agreed)]
FORCE11 Joint Declaration of Data Citation Principles (2014) — data should be cited as a first- · RDA-F3-01M — metadata clearly and explicitly includes the identifier of the data it describes · FsF-F3-01M — F-UJI: 'Metadata includes the identifier of the data it describes'
Advisory · not in the published score
“The metagenome-assembled genomes have been deposited in GenBank under the accession numbers JAVSPN000000000 and JAVSPO000000000 for WG22 and LS22, respectively. The versions described in this paper are versions JAVSPN010000000 and JAVSPO010000000 . The raw sequence files are available as sequence read archives under SRR25339258 and SRR25339257 . The BioProject can be found under the reference PRJNA996591 .”
The data-availability statement points to repository records with specific accessions (Colavizza category 3).
Colavizza, Hrynaszkiewicz, Staden, Whitaker & McGillivray (2020), 'The citation advantage of li · Springer Nature research data policy — Data Availability Statements: standard statement templat · RDA-F3-01M — metadata clearly and explicitly includes the identifier of the data it describes
“TABLE 1 Summary of metagenome-assembled genomes WG22 and LS22”
The paper includes a table (Table 1) that itemizes genome characteristics such as accession, read count, length, completeness, etc.
RDA-F2-01M — 'Rich metadata is provided to allow discovery' (priority Essential) · FsF-F2-01M — F-UJI: 'Metadata includes descriptive core elements to support data findability' · FsF-R1-01MD — F-UJI: 'Metadata specifies the content of the data'
“The metagenome-assembled genomes have been deposited in GenBank under the accession numbers JAVSPN000000000 and JAVSPO000000000 for WG22 and LS22, respectively.”
The data are deposited in a public repository with no stated precondition (e.g., embargo, registration, or request). [majority verdict 'yes' (3/5 passes agreed)]
RDA-A1.1-01D — 'Data is accessible through a free access protocol' · FsF-A1-01M — F-UJI: 'Metadata contains access level and access conditions of the data' · NSTC Desirable Characteristics of Data Repositories (2022) — 'Free and Easy Access'
Advisory · not in the published score
“The metagenome-assembled genomes have been deposited in GenBank under the accession numbers JAVSPN000000000 and JAVSPO000000000 for WG22 and LS22, respectively.”
The paper describes the action of depositing in GenBank but does not apply an explicit access-level label (e.g., 'open access') to the data themselves.
FsF-A1-01M — F-UJI: 'Metadata contains access level and access conditions of the data' · RDA-A1-01M — metadata contains information to enable the user to get access to the data · COAR Controlled Vocabularies — Access Rights v1.0 (open / embargoed / restricted / metadata-onl
The data are not sensitive or human-subject, so no gatekeeper is required or named.
NIH Genomic Data Sharing Policy (NOT-OD-14-124) — controlled-access via a Data Access Committee · RDA-A1.2-01D — 'Data is accessible through an access protocol that supports authentication and · NIH DMS Policy Element 5 (NOT-OD-21-014) — Access, Distribution, or Reuse Considerations (conse
The paper states neither when the data become available (timing) nor how long they persist (retention). [majority verdict 'no' (4/5 passes agreed)]
NIH DMS Plan Element 4 (NOT-OD-21-014) — Data Preservation, Access, and Associated Timelines · NSTC Desirable Characteristics (2022), Organizational Infrastructure: 'Retention Policy' · RDA-A2-01M — 'Metadata is guaranteed to remain available after data is no longer available'
No file format token (e.g., FASTA, FASTQ) is explicitly named for the released data in the text.
FsF-R1.3-02D — F-UJI: 'Data is available in a file format recommended by the target research co · RDA-R1.3-02D — data is expressed in a machine-understandable community standard · RDA-I1-01D — data uses a knowledge representation expressed in a standardised format
Advisory · not in the published score
No data or metadata community standard (e.g., MIxS, ISA-Tab, an ontology) is named as applied to the data.
RDA-R1.3-01M — 'Metadata complies with a community standard' (priority Essential) · RDA-R1.3-01D — 'Data complies with a community standard' · RDA-I2-01M — '(Meta)data use vocabularies that follow FAIR principles'
“FastANI reference GCF_010196425.1 GCA_012516315.1”
The paper includes GenBank assembly accessions (GCF_010196425.1, GCA_012516315.1) for reference genomes used in analysis.
RDA-I3-01M — '(meta)data include references to other (meta)data' · RDA-I3-03M — 'metadata includes qualified references to other metadata' · FsF-I3-01M — F-UJI: 'Metadata includes links between the data and its related entities'
No license or reuse terms are stated for the data themselves.
RDA-R1.1-01M — 'Metadata includes information about the licence under which the data can be reu · RDA-R1.1-02M — 'Metadata refers to a standard reuse licence' · RDA-R1.1-03M — 'Metadata refers to a machine-understandable reuse licence'
“The versions described in this paper are versions JAVSPN010000000 and JAVSPO010000000 .”
Versioned accession numbers (JAVSPN010000000, JAVSPO010000000) are provided to pin the snapshot.
DataCite Metadata Schema 4.6 — the 'Version' property · RDA-R1.2-01M — provenance information (which version was used is provenance) · NSTC Desirable Characteristics of Data Repositories (2022) — 'Provenance', 'Retention Policy'
No code location is given for the study's own code.
NIH DMS Policy Element 2 (NOT-OD-21-014) — 'Related Tools, Software and/or Code' · FAIR4RS Principles v1.0 (Chue Hong et al., 2022; RDA/FORCE11/ReSA) — FAIR Principles for Resear · FORCE11 Software Citation Principles (Smith, Katz & Niemeyer, 2016, PeerJ CS 2:e86)
“Travel and research were funded by award #1953468 by the National Science Foundation”
Specific award/grant numbers (e.g., #1953468, 1P01ES028939-01, 1840715, #10010691) are provided. [majority verdict 'yes' (3/5 passes agreed)]
DataCite Metadata Schema 4.6 — 'FundingReference' property (funderName, funderIdentifier, award · Crossref Funder Registry — canonical funder identifiers for funding metadata · RDA-F2-01M — rich metadata provided to allow discovery (funding is part of the descriptive reco
Advisory · not in the published score
“sequenced on a NovaSeq S4”
The paper names specific instruments and tools (e.g., NovaSeq S4, DNeasy PowerWater Kit, Trimmomatic v0.36, metaSPAdes v3.15.3). [majority verdict 'yes' (3/5 passes agreed)]
RDA-R1.2-01M — 'Metadata includes provenance information according to community- specific standa · FsF-R1.2-01M — F-UJI: 'Metadata includes provenance information about data creation or generati · W3C PROV-O (W3C Recommendation, 2013) — the entity/activity/agent model of provenance
“TABLE 1 Summary of metagenome-assembled genomes WG22 and LS22”
Variable-level definitions (e.g., genome length, completeness, contamination) are provided inside the article in Table 1, but no documentation object (e.g., README) is said to accompany the data. [majority verdict 'partial' (4/5 passes agreed)]
RDA-R1-01M — '(Meta)data are richly described with a plurality of accurate and relevant attribu · FsF-R1-01MD — F-UJI: 'Metadata specifies the content of the data' · NIH DMS Policy Element 3 (NOT-OD-21-014) — Standards (documentation and metadata to accompany t
Calibrated FAIR score — a parallel quality metric, independent of the DataRank citation score. See the full evaluation →
Base Score Contribution
0.241
From this paper's citation signal
Citation Network Contribution
0.0115
From 1 citing papers with measurable signal
Ranked by each citer's contribution to N(p) — log1p(Cq) divided by its reference count — out of 2 citers.
National Science Foundation
Grant: 1953468, 1840715
NIEHS NIH HHS
Grant: P01 ES028938
Ohio Department of Higher Education
Grant: 10010691
HHS | National Institutes of Health
Grant: 1P01ES028939-01
Lake Erie Center for the Great Lakes and Human Health
NIEHS NIH HHS
Grant: P01 ES028939
National Science Foundation
Grant: 1840715
Lake Erie Center for Fresh Waters and Human Health
National Science Foundation
Grant: 1953468
IRES Track II: Advanced studies institute on water quality and harmful algal blooms in Lake Victoria
Fields of Study
Keywords