Draft Genome Sequence of Novel Staphylococcus epidermidis Strain EVL2000, Exhibiting Pathogenicity against Caenorhabditis elegans is a dataset published in Microbiology Resource Announcements (2022). On theSindex it has a DataRank of 0.104, placing it in the top 77.8% of the data-sharing corpus. It has been cited 1 time. Its calibrated FAIR score is 63/100.
Ranks in the top 78% for downstream scientific impact
Linked data & code
DataRank reads this dataset's downstream impact straight off the citation graph — no black box, no proprietary weighting. How is this computed?
FAIR checklist signals are shown for context only and do not affect DataRank scoring.
Full FAIR picture · advisory
The headline score is computed from the scored criteria — the fact-shaped checks (a repository, an accession, a licence) that two independent models agree on. The advisory criteria below are real FAIR guidance but rest on judgment calls that models read differently, so they inform without moving the number.
“The whole-genome sequence of S. epidermidis EVL2000 has been deposited in DDBJ/ENA/GenBank under the accession number JAJSYT000000000 .”
The paper provides a GenBank accession (JAJSYT000000000), which is a persistent identifier in a recognized scheme. [majority verdict 'yes' (4/5 passes agreed)]
RDA-F1-01D — FAIR Data Maturity Model: 'Data is identified by a persistent identifier' (priorit · RDA-F1-02D — FAIR Data Maturity Model: 'Data is identified by a globally unique identifier' · FsF-F1-02D — F-UJI/FAIRsFAIR: 'Data is assigned a persistent identifier'
“The whole-genome sequence of S. epidermidis EVL2000 has been deposited in DDBJ/ENA/GenBank under the accession number JAJSYT000000000 .”
The repository is named as DDBJ/ENA/GenBank, which are proper-noun repositories. [majority verdict 'yes' (4/5 passes agreed)]
RDA-F4-01M — FAIR Data Maturity Model: metadata is offered so it can be harvested and indexed ( · NIH DMS Policy Element 4 (NOT-OD-21-014) — name the repository where data will be archived · NSTC Desirable Characteristics of Data Repositories (2022) — 'Long-Term Sustainability', 'Reten
“The whole-genome sequence of S. epidermidis EVL2000 has been deposited in DDBJ/ENA/GenBank under the accession number JAJSYT000000000 .”
The dataset identifiers appear only in the body text (data availability statement), not in the reference list.
FORCE11 Joint Declaration of Data Citation Principles (2014) — data should be cited as a first- · RDA-F3-01M — metadata clearly and explicitly includes the identifier of the data it describes · FsF-F3-01M — F-UJI: 'Metadata includes the identifier of the data it describes'
Advisory · not in the published score
“Data availability. The whole-genome sequence of S. epidermidis EVL2000 has been deposited in DDBJ/ENA/GenBank under the accession number JAJSYT000000000 . The version described in this paper is JAJSYT010000000 . Raw reads have been deposited in the Sequence Read Archive (SRA) under the accession number SRR17282514 .”
The data availability statement points to repository records with specific accessions (GenBank and SRA).
Colavizza, Hrynaszkiewicz, Staden, Whitaker & McGillivray (2020), 'The citation advantage of li · Springer Nature research data policy — Data Availability Statements: standard statement templat · RDA-F3-01M — metadata clearly and explicitly includes the identifier of the data it describes
“The assembled genome contained 100 contigs (>200 bp), was 2,509,527 bp in size, and had a GC content of 31.96% and an N 50 value of 105,624 bp.”— not found in the paper; verdict downgraded
The dataset's content is described in running prose (assembly statistics) without an itemised inventory or section heading. [downgraded to 'no' — no verifiable quote from the paper]
RDA-F2-01M — 'Rich metadata is provided to allow discovery' (priority Essential) · FsF-F2-01M — F-UJI: 'Metadata includes descriptive core elements to support data findability' · FsF-R1-01MD — F-UJI: 'Metadata specifies the content of the data'
“The whole-genome sequence of S. epidermidis EVL2000 has been deposited in DDBJ/ENA/GenBank under the accession number JAJSYT000000000 .”
The data are stated to be deposited in a public repository (GenBank/SRA) with no precondition, implying immediate open access. [majority verdict 'yes' (4/5 passes agreed)]
RDA-A1.1-01D — 'Data is accessible through a free access protocol' · FsF-A1-01M — F-UJI: 'Metadata contains access level and access conditions of the data' · NSTC Desirable Characteristics of Data Repositories (2022) — 'Free and Easy Access'
Advisory · not in the published score
“The whole-genome sequence of S. epidermidis EVL2000 has been deposited in DDBJ/ENA/GenBank under the accession number JAJSYT000000000 .”
The paper describes the action of depositing the data in a public repository but does not explicitly label the access level (e.g., 'open access'). [majority verdict 'partial' (4/5 passes agreed)]
FsF-A1-01M — F-UJI: 'Metadata contains access level and access conditions of the data' · RDA-A1-01M — metadata contains information to enable the user to get access to the data · COAR Controlled Vocabularies — Access Rights v1.0 (open / embargoed / restricted / metadata-onl
“The whole-genome sequence of S. epidermidis EVL2000 has been deposited in DDBJ/ENA/GenBank under the accession number JAJSYT000000000 .”
The data are not sensitive (bacterial genome), and no gatekeeper is named; the data are openly accessible.
NIH Genomic Data Sharing Policy (NOT-OD-14-124) — controlled-access via a Data Access Committee · RDA-A1.2-01D — 'Data is accessible through an access protocol that supports authentication and · NIH DMS Policy Element 5 (NOT-OD-21-014) — Access, Distribution, or Reuse Considerations (conse
“The whole-genome sequence of S. epidermidis EVL2000 has been deposited in DDBJ/ENA/GenBank under the accession number JAJSYT000000000 .”
The paper states that the data have been deposited (availability timing) but does not specify how long they will be retained. [majority verdict 'partial' (3/5 passes agreed)]
NIH DMS Plan Element 4 (NOT-OD-21-014) — Data Preservation, Access, and Associated Timelines · NSTC Desirable Characteristics (2022), Organizational Infrastructure: 'Retention Policy' · RDA-A2-01M — 'Metadata is guaranteed to remain available after data is no longer available'
No file format token (e.g., FASTA, FASTQ) is explicitly named for the released data.
FsF-R1.3-02D — F-UJI: 'Data is available in a file format recommended by the target research co · RDA-R1.3-02D — data is expressed in a machine-understandable community standard · RDA-I1-01D — data uses a knowledge representation expressed in a standardised format
Advisory · not in the published score
No data or metadata community standard (e.g., MIAME, GO) is named; the paper mentions only software tools and pipelines. [majority verdict 'no' (4/5 passes agreed)]
RDA-R1.3-01M — 'Metadata complies with a community standard' (priority Essential) · RDA-R1.3-01D — 'Data complies with a community standard' · RDA-I2-01M — '(Meta)data use vocabularies that follow FAIR principles'
No identifiers for external resources (e.g., reference genome accession, database build) are provided; only software versions are mentioned.
RDA-I3-01M — '(meta)data include references to other (meta)data' · RDA-I3-03M — 'metadata includes qualified references to other metadata' · FsF-I3-01M — F-UJI: 'Metadata includes links between the data and its related entities'
No license is explicitly stated for the data; the CC-BY 4.0 license applies only to the article.
RDA-R1.1-01M — 'Metadata includes information about the licence under which the data can be reu · RDA-R1.1-02M — 'Metadata refers to a standard reuse licence' · RDA-R1.1-03M — 'Metadata refers to a machine-understandable reuse licence'
“The version described in this paper is JAJSYT010000000 .”
A version token (JAJSYT010000000) is provided for the genome assembly, identifying the snapshot. [majority verdict 'yes' (4/5 passes agreed)]
DataCite Metadata Schema 4.6 — the 'Version' property · RDA-R1.2-01M — provenance information (which version was used is provenance) · NSTC Desirable Characteristics of Data Repositories (2022) — 'Provenance', 'Retention Policy'
No custom code is mentioned; only third-party tools were used, and no code availability statement is provided.
NIH DMS Policy Element 2 (NOT-OD-21-014) — 'Related Tools, Software and/or Code' · FAIR4RS Principles v1.0 (Chue Hong et al., 2022; RDA/FORCE11/ReSA) — FAIR Principles for Resear · FORCE11 Software Citation Principles (Smith, Katz & Niemeyer, 2016, PeerJ CS 2:e86)
“N.D. received support from a Kansas-INBRE semester scholar award (grant P20GM103418).”
Grant numbers are provided for multiple funders (e.g., P20GM103418, P20GM113117, K12GM63651, P20GM103638).
DataCite Metadata Schema 4.6 — 'FundingReference' property (funderName, funderIdentifier, award · Crossref Funder Registry — canonical funder identifiers for funding metadata · RDA-F2-01M — rich metadata provided to allow discovery (funding is part of the descriptive reco
Advisory · not in the published score
“Library preparation and sequencing were performed by the Genome Sequencing Core at the University of Kansas (KU). The DNA library was prepared using Illumina Nextera chemistry following the manufacturer’s instructions and was sequenced on the Illumina MiSeq platform with the Illumina v2 reagent kit using the paired-end protocol (2 × 150 bp).”
The paper names specific instruments, kits, and software versions (Illumina MiSeq, DNeasy kit, FastQC, SPAdes) used to produce the data.
RDA-R1.2-01M — 'Metadata includes provenance information according to community- specific standa · FsF-R1.2-01M — F-UJI: 'Metadata includes provenance information about data creation or generati · W3C PROV-O (W3C Recommendation, 2013) — the entity/activity/agent model of provenance
“The assembled genome contained 100 contigs (>200 bp), was 2,509,527 bp in size, and had a GC content of 31.96% and an N 50 value of 105,624 bp.”— not found in the paper; verdict downgraded
Variable-level definitions are provided within the article (assembly statistics) but no documentation object (README, codebook) is said to accompany the data. [downgraded to 'no' — no verifiable quote from the paper]
RDA-R1-01M — '(Meta)data are richly described with a plurality of accurate and relevant attribu · FsF-R1-01MD — F-UJI: 'Metadata specifies the content of the data' · NIH DMS Policy Element 3 (NOT-OD-21-014) — Standards (documentation and metadata to accompany t
Calibrated FAIR score — a parallel quality metric, independent of the DataRank citation score. See the full evaluation →
Base Score Contribution
0.104
From this paper's citation signal
Citation Network Contribution
0
Citation network not refreshed for this result
This paper's DataRank is currently driven only by its base citation score. Citation network data was not refreshed for this result.
Learn more about DataRank methodology →HHS | National Institutes of Health
Grant: K12GM63651
HHS | National Institutes of Health
Grant: P20GM103418
HHS | National Institutes of Health
Grant: P20GM113117
NIGMS NIH HHS
Grant: P20 GM103638
NIGMS NIH HHS
Grant: K12 GM063651
National Institutes of Health
Grant: 4K12GM063651-15
University of Kansas/Haskell Indian Nations University IRACDA Project
National Institutes of Health
Grant: 2P20GM103638-06
Molecular Analysis of Disease Pathways
National Institutes of Health
Grant: 5P20GM113117-03
Chemical Biology of Infectious Disease
National Institutes of Health
Grant: 5P20GM103418-22
Kansas IDeA Network of Biomedical Research Excellence (K-INBRE)
FWCI
0.08
Citation Percentile
0.4%
Citation Trend
Fields of Study
Keywords
Sustainable Development Goals