Complete Genome Sequence of Myophage Ec_Makalu_002, Which Infects Uropathogenic Escherichia coli is a dataset published in Microbiology Resource Announcements (2020). On theSindex it has a DataRank of 0.208, placing it in the top 65% of the data-sharing corpus. It has been cited 3 times. Its calibrated FAIR score is 58/100.
Ranks in the top 65% for downstream scientific impact
Linked data & code
DataRank reads this dataset's downstream impact straight off the citation graph — no black box, no proprietary weighting. How is this computed?
FAIR checklist signals are shown for context only and do not affect DataRank scoring.
Full FAIR picture · advisory
The headline score is computed from the scored criteria — the fact-shaped checks (a repository, an accession, a licence) that two independent models agree on. The advisory criteria below are real FAIR guidance but rest on judgment calls that models read differently, so they inform without moving the number.
“The genome sequence and associated data for phage Ec_Makalu_002 were deposited under GenBank accession number MN709127 , BioProject accession number PRJNA594990 , and SRA accession number SRR10671636 .”
The paper provides repository accession numbers (GenBank, BioProject, SRA) which are persistent identifier schemes.
RDA-F1-01D — FAIR Data Maturity Model: 'Data is identified by a persistent identifier' (priorit · RDA-F1-02D — FAIR Data Maturity Model: 'Data is identified by a globally unique identifier' · FsF-F1-02D — F-UJI/FAIRsFAIR: 'Data is assigned a persistent identifier'
“The genome sequence and associated data for phage Ec_Makalu_002 were deposited under GenBank accession number MN709127 , BioProject accession number PRJNA594990 , and SRA accession number SRR10671636 .”
The data are deposited in GenBank, BioProject, and SRA, which are established repositories.
RDA-F4-01M — FAIR Data Maturity Model: metadata is offered so it can be harvested and indexed ( · NIH DMS Policy Element 4 (NOT-OD-21-014) — name the repository where data will be archived · NSTC Desirable Characteristics of Data Repositories (2022) — 'Long-Term Sustainability', 'Reten
“The genome sequence and associated data for phage Ec_Makalu_002 were deposited under GenBank accession number MN709127 , BioProject accession number PRJNA594990 , and SRA accession number SRR10671636 .”
The dataset identifiers appear only in the body text (data availability statement), not in the reference list.
FORCE11 Joint Declaration of Data Citation Principles (2014) — data should be cited as a first- · RDA-F3-01M — metadata clearly and explicitly includes the identifier of the data it describes · FsF-F3-01M — F-UJI: 'Metadata includes the identifier of the data it describes'
Advisory · not in the published score
“The genome sequence and associated data for phage Ec_Makalu_002 were deposited under GenBank accession number MN709127 , BioProject accession number PRJNA594990 , and SRA accession number SRR10671636 .”
The statement points to repository records with accessions, matching Colavizza category 3.
Colavizza, Hrynaszkiewicz, Staden, Whitaker & McGillivray (2020), 'The citation advantage of li · Springer Nature research data policy — Data Availability Statements: standard statement templat · RDA-F3-01M — metadata clearly and explicitly includes the identifier of the data it describes
“The complete genome of phage Ec_Makalu_002 was 164,674 bp long with an average GC composition of 40.6%.”
The dataset content is described in running prose, not in an itemised inventory or table.
RDA-F2-01M — 'Rich metadata is provided to allow discovery' (priority Essential) · FsF-F2-01M — F-UJI: 'Metadata includes descriptive core elements to support data findability' · FsF-R1-01MD — F-UJI: 'Metadata specifies the content of the data'
“The genome sequence and associated data for phage Ec_Makalu_002 were deposited under GenBank accession number MN709127 , BioProject accession number PRJNA594990 , and SRA accession number SRR10671636 .”
The statement gives a route to the data with no stated precondition; the data are publicly available in repositories.
RDA-A1.1-01D — 'Data is accessible through a free access protocol' · FsF-A1-01M — F-UJI: 'Metadata contains access level and access conditions of the data' · NSTC Desirable Characteristics of Data Repositories (2022) — 'Free and Easy Access'
Advisory · not in the published score
“The genome sequence and associated data for phage Ec_Makalu_002 were deposited under GenBank accession number MN709127 , BioProject accession number PRJNA594990 , and SRA accession number SRR10671636 .”
The paper does not apply an explicit access-level label (e.g., 'open access') but describes the deposit action, from which availability can be inferred.
FsF-A1-01M — F-UJI: 'Metadata contains access level and access conditions of the data' · RDA-A1-01M — metadata contains information to enable the user to get access to the data · COAR Controlled Vocabularies — Access Rights v1.0 (open / embargoed / restricted / metadata-onl
The data are not sensitive or human-subject; no gatekeeper is mentioned.
NIH Genomic Data Sharing Policy (NOT-OD-14-124) — controlled-access via a Data Access Committee · RDA-A1.2-01D — 'Data is accessible through an access protocol that supports authentication and · NIH DMS Policy Element 5 (NOT-OD-21-014) — Access, Distribution, or Reuse Considerations (conse
No sentence states when the data become available or how long they persist. [majority verdict 'no' (4/5 passes agreed)]
NIH DMS Plan Element 4 (NOT-OD-21-014) — Data Preservation, Access, and Associated Timelines · NSTC Desirable Characteristics (2022), Organizational Infrastructure: 'Retention Policy' · RDA-A2-01M — 'Metadata is guaranteed to remain available after data is no longer available'
No file format (e.g., FASTA, GenBank) is explicitly named for the released data.
FsF-R1.3-02D — F-UJI: 'Data is available in a file format recommended by the target research co · RDA-R1.3-02D — data is expressed in a machine-understandable community standard · RDA-I1-01D — data uses a knowledge representation expressed in a standardised format
Advisory · not in the published score
No data or metadata community standard (e.g., MIAME, MINSEQE) is named.
RDA-R1.3-01M — 'Metadata complies with a community standard' (priority Essential) · RDA-R1.3-01D — 'Data complies with a community standard' · RDA-I2-01M — '(Meta)data use vocabularies that follow FAIR principles'
“ECD7 (GenBank accession number NC_041936.1 ; 92.26%), GEC-3S ( HE978309.1 ; 92.23%), and Phi1 ( EF437941.1 ; 91.43%)”
The paper provides accession numbers for other phage genomes used in comparison.
RDA-I3-01M — '(meta)data include references to other (meta)data' · RDA-I3-03M — 'metadata includes qualified references to other metadata' · FsF-I3-01M — F-UJI: 'Metadata includes links between the data and its related entities'
No license or terms of use are named for the data.
RDA-R1.1-01M — 'Metadata includes information about the licence under which the data can be reu · RDA-R1.1-02M — 'Metadata refers to a standard reuse licence' · RDA-R1.1-03M — 'Metadata refers to a machine-understandable reuse licence'
No version token or date is provided to identify the snapshot.
DataCite Metadata Schema 4.6 — the 'Version' property · RDA-R1.2-01M — provenance information (which version was used is provenance) · NSTC Desirable Characteristics of Data Repositories (2022) — 'Provenance', 'Retention Policy'
No custom code is mentioned, and no locator for code is provided.
NIH DMS Policy Element 2 (NOT-OD-21-014) — 'Related Tools, Software and/or Code' · FAIR4RS Principles v1.0 (Chue Hong et al., 2022; RDA/FORCE11/ReSA) — FAIR Principles for Resear · FORCE11 Software Citation Principles (Smith, Katz & Niemeyer, 2016, PeerJ CS 2:e86)
“award numbers PhD/73-74/S and T-07”
The paper provides specific award/grant numbers from the University Grants Commission.
DataCite Metadata Schema 4.6 — 'FundingReference' property (funderName, funderIdentifier, award · Crossref Funder Registry — canonical funder identifiers for funding metadata · RDA-F2-01M — rich metadata provided to allow discovery (funding is part of the descriptive reco
Advisory · not in the published score
“The DNA library was prepared using an Illumina Nextera XT kit, and whole-genome sequencing was performed on a NextSeq 500 platform”
The paper names specific instruments and kits used to generate the data.
RDA-R1.2-01M — 'Metadata includes provenance information according to community- specific standa · FsF-R1.2-01M — F-UJI: 'Metadata includes provenance information about data creation or generati · W3C PROV-O (W3C Recommendation, 2013) — the entity/activity/agent model of provenance
No codebook, README, or variable-definition table is mentioned; the genome description is in prose. [majority verdict 'no' (4/5 passes agreed)]
RDA-R1-01M — '(Meta)data are richly described with a plurality of accurate and relevant attribu · FsF-R1-01MD — F-UJI: 'Metadata specifies the content of the data' · NIH DMS Policy Element 3 (NOT-OD-21-014) — Standards (documentation and metadata to accompany t
Calibrated FAIR score — a parallel quality metric, independent of the DataRank citation score. See the full evaluation →
Base Score Contribution
0.208
From this paper's citation signal
Citation Network Contribution
0
Citation network not refreshed for this result
This paper's DataRank is currently driven only by its base citation score. Citation network data was not refreshed for this result.
Learn more about DataRank methodology →HHS | National Institutes of Health
Grant: Intramural Research Program
University Grants Commission- Nepal
Grant: PhD/73-74/S
University Grants Commission- Nepal
Grant: T-07
FWCI
0.14
Citation Percentile
0.5%
Citation Trend
Fields of Study
Keywords