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The sequence of rice chromosomes 11 and 12, rich in disease resistance genes and recent gene duplications

Name: The sequence of rice chromosomes 11 and 12, rich in disease resistance genes and recent gene duplications
Published: 2005

BMC Biology(2005)10.1186/1741-7007-3-20Source: DataRank Database

The sequence of rice chromosomes 11 and 12, rich in disease resistance genes and recent gene duplications is a dataset published in BMC Biology (2005). On theSindex it has a DataRank of 9.5, placing it in the top 1.5% of the data-sharing corpus. It has been cited 259 times, with 181 citing works in its 1-hop citation network.

Top 2%percentile

9.5DataRank

Ranks in the top 2% for downstream scientific impact

Data paper259 citations · 181 citing works in its network

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Linked data & code

DataRank reads this dataset's downstream impact straight off the citation graph — no black box, no proprietary weighting. How is this computed?

›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Impact (FWCI 20.72)OA: goldTopics (24)Linked Datasets (25)DataCite Reuse (25)IDs (PubMed, OpenAlex)SDGs (1)

FAIR Checklist

Context only (not used in score)

Findable (2/2)

Has DOI
Indexed in repositories

Accessible (0/2)

Interoperable (2/2)

DataCite relations
Linked datasets

Reusable (1/3)

Dataset classification

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DataRank Breakdown

Base Score 9%Citation Network 91%

Base Score Contribution

0.834

From this paper's citation signal

Citation Network Contribution

8.6

From 164 citing papers with measurable signal

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Top 5 citers driving the network score

Ranked by each citer's contribution to N(p) — log1p(C_q) divided by its reference count — out of 181 citers.

Comparative analyses reveal high levels of conserved colinearity between the finger millet and rice genomes
Theoretical and Applied Genetics2007110 citations18 referencesContributes 0.262
The TIGR Rice Genome Annotation Resource: improvements and new features
Nucleic Acids Research20061,357 citations32 referencesContributes 0.225
Recent duplications dominate NBS-encoding gene expansion in two woody species
Molecular Genetics and Genomics2008506 citations41 referencesContributes 0.152
The Sorghum bicolor genome and the diversification of grasses
Nature20093,234 citations54 referencesContributes 0.150
Detection and correction of assembly errors of rice Nipponbare reference sequence
Plant Biology201316 citations20 referencesContributes 0.142

Live enrichment

PubMed:16188032 OpenAlex:https://openalex.org/W1573987240

FWCI

20.72

Citation Percentile

1.0%

Citation Trend

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goldLicense: cc-by

journalhttps://bmcbiol.biomedcentral.com/counter/pdf/10.1186/1741-7007-3-20

publisherhttps://bmcbiol.biomedcentral.com/counter/pdf/10.1186/1741-7007-3-20

publisherhttps://link.springer.com/content/pdf/10.1186/1741-7007-3-20.pdf

journalhttps://doi.org/10.1186/1741-7007-3-20

repositoryhttps://pubmed.ncbi.nlm.nih.gov/16188032

Fields of Study

Chromosomal and Genetic VariationsGenetic Mapping and Diversity in Plants and AnimalsPlant Disease Resistance and Genetics

MeSH Terms

Chromosome MappingImmunity, InnatePlant DiseasesRepetitive Sequences, Nucleic AcidOryzaTriticumGenome, PlantGene DuplicationChromosomes, Plant

Keywords

BiologyGene duplicationGeneticsSyntenyGenomeGeneSegmental duplicationChromosomeTransposable elementGenome evolutionGene familyPlant disease resistance

Sustainable Development Goals

SDG 0: Life in Land

Additional file 10 of Conversion between 100-million-year-old duplicated genes contributes to rice subspecies divergence

10.6084/m9.figshare.14812459.v1figshare

Additional file 10 of Conversion between 100-million-year-old duplicated genes contributes to rice subspecies divergence

10.6084/m9.figshare.14812459figshare

Additional file 11 of Conversion between 100-million-year-old duplicated genes contributes to rice subspecies divergence

10.6084/m9.figshare.14812462.v1figshare

Additional file 11 of Conversion between 100-million-year-old duplicated genes contributes to rice subspecies divergence

10.6084/m9.figshare.14812462figshare

Additional file 12 of Conversion between 100-million-year-old duplicated genes contributes to rice subspecies divergence

10.6084/m9.figshare.14812465.v1figshare

Additional file 12 of Conversion between 100-million-year-old duplicated genes contributes to rice subspecies divergence

10.6084/m9.figshare.14812465figshare

Additional file 13 of Conversion between 100-million-year-old duplicated genes contributes to rice subspecies divergence

10.6084/m9.figshare.14812468.v1figshare

Additional file 13 of Conversion between 100-million-year-old duplicated genes contributes to rice subspecies divergence

10.6084/m9.figshare.14812468figshare

Additional file 15 of Conversion between 100-million-year-old duplicated genes contributes to rice subspecies divergence

10.6084/m9.figshare.14812477.v1figshare

Additional file 15 of Conversion between 100-million-year-old duplicated genes contributes to rice subspecies divergence

10.6084/m9.figshare.14812477figshare

Additional file 16 of Conversion between 100-million-year-old duplicated genes contributes to rice subspecies divergence

10.6084/m9.figshare.14812480.v1figshare

Additional file 16 of Conversion between 100-million-year-old duplicated genes contributes to rice subspecies divergence

10.6084/m9.figshare.14812480figshare

Additional file 17 of Conversion between 100-million-year-old duplicated genes contributes to rice subspecies divergence

10.6084/m9.figshare.14812483.v1figshare

Additional file 17 of Conversion between 100-million-year-old duplicated genes contributes to rice subspecies divergence

10.6084/m9.figshare.14812483figshare

Additional file 18 of Conversion between 100-million-year-old duplicated genes contributes to rice subspecies divergence

10.6084/m9.figshare.14812489.v1figshare

Additional file 18 of Conversion between 100-million-year-old duplicated genes contributes to rice subspecies divergence

10.6084/m9.figshare.14812489figshare

Additional file 1 of Conversion between 100-million-year-old duplicated genes contributes to rice subspecies divergence

10.6084/m9.figshare.14812495.v1figshare

Additional file 1 of Conversion between 100-million-year-old duplicated genes contributes to rice subspecies divergence

10.6084/m9.figshare.14812495figshare

Additional file 20 of Conversion between 100-million-year-old duplicated genes contributes to rice subspecies divergence

10.6084/m9.figshare.14812498.v1figshare

Additional file 20 of Conversion between 100-million-year-old duplicated genes contributes to rice subspecies divergence

10.6084/m9.figshare.14812498figshare

Related Papers (4)

Clustal W and Clustal X version 2.0

N/A

1.5DataRank · unranked

Bioinformatics(2007)

co-cited

10.1093/bioinformatics/btm404

The Genomes of Oryza sativa: A History of Duplications

Top 2%

9.0DataRank

PLoS Biology(2005)

co-cited

10.1371/journal.pbio.0030038

Buffering of crucial functions by paleologous duplicated genes may contribute cyclicality to angiosperm genome duplication

N/A

0.812DataRank · unranked

Proceedings of the National Academy of Sciences(2006)

co-cited

10.1073/pnas.0507782103

Heterogeneous Patterns of Gene-Expression Diversification in Mammalian Gene Duplicates

N/A

2.2DataRank · unranked

Molecular Biology and Evolution(2010)

co-cited

10.1093/molbev/msp242

The sequence of rice chromosomes 11 and 12, rich in disease resistance genes and recent gene duplications

FAIR Checklist

DataRank Breakdown

Top 5 citers driving the network score

Impact

Open Access

Topics

Linked Datasets (25)

Related Papers (4)