A resource database for protein kinase substrate sequence-preference motifs based on large-scale mass spectrometry data is a dataset published in Cell Communication and Signaling (2024). On theSindex it has a DataRank of 0.584, placing it in the top 33.6% of the data-sharing corpus. It has been cited 15 times, with 13 citing works in its 1-hop citation network. Its calibrated FAIR score is 58/100.
Ranks in the top 34% for downstream scientific impact
DataRank reads this dataset's downstream impact straight off the citation graph — no black box, no proprietary weighting. How is this computed?
FAIR checklist signals are shown for context only and do not affect DataRank scoring.
Full FAIR picture · advisory
The headline score is computed from the scored criteria — the fact-shaped checks (a repository, an accession, a licence) that two independent models agree on. The advisory criteria below are real FAIR guidance but rest on judgment calls that models read differently, so they inform without moving the number.
“The datasets generated and/or analysed during the current study are available online at the following web links: https:// esbl. nhlbi. nih. gov/ Datab ases/ Kinase_ Logos/”
The data are identified by a URL, not a persistent identifier scheme such as DOI or Handle. [majority verdict 'partial' (4/5 passes agreed)]
RDA-F1-01D — FAIR Data Maturity Model: 'Data is identified by a persistent identifier' (priorit · RDA-F1-02D — FAIR Data Maturity Model: 'Data is identified by a globally unique identifier' · FsF-F1-02D — F-UJI/FAIRsFAIR: 'Data is assigned a persistent identifier'
“The datasets generated and/or analysed during the current study are available online at the following web links: https:// esbl. nhlbi. nih. gov/ Datab ases/ Kinase_ Logos/”
The host is a lab website (esbl.nhlbi.nih.gov), not a formal data repository listed in re3data. [majority verdict 'partial' (4/5 passes agreed)]
RDA-F4-01M — FAIR Data Maturity Model: metadata is offered so it can be harvested and indexed ( · NIH DMS Policy Element 4 (NOT-OD-21-014) — name the repository where data will be archived · NSTC Desirable Characteristics of Data Repositories (2022) — 'Long-Term Sustainability', 'Reten
“https:// esbl. nhlbi. nih. gov/ Datab ases/ Kinase_ Logos/”
The dataset identifier appears only in the body text (data availability statement), not as a reference-list entry. [majority verdict 'partial' (4/5 passes agreed)]
FORCE11 Joint Declaration of Data Citation Principles (2014) — data should be cited as a first- · RDA-F3-01M — metadata clearly and explicitly includes the identifier of the data it describes · FsF-F3-01M — F-UJI: 'Metadata includes the identifier of the data it describes'
Advisory · not in the published score
“The datasets generated and/or analysed during the current study are available online at the following web links: https:// esbl. nhlbi. nih. gov/ Datab ases/ Kinase_ Logos/ https:// esbl. nhlbi. nih. gov/ Datab ases/ Kinase_ Logos/ Kinas eTree. html https:// esbl. nhlbi. nih. gov/ Datab ases/ Kinase_ Logos/ Kinas ePred ictor. html”
The statement points to a website (lab page) rather than a repository record with an accession or DOI. [majority verdict 'partial' (4/5 passes agreed)]
Colavizza, Hrynaszkiewicz, Staden, Whitaker & McGillivray (2020), 'The citation advantage of li · Springer Nature research data policy — Data Availability Statements: standard statement templat · RDA-F3-01M — metadata clearly and explicitly includes the identifier of the data it describes
“We generated target sequence preference motifs for each of the 384 protein kinases using the data from Sugiyama et al.”
The dataset's content is described in a sentence, not in an itemised inventory like a table or list. [majority verdict 'partial' (4/5 passes agreed)]
RDA-F2-01M — 'Rich metadata is provided to allow discovery' (priority Essential) · FsF-F2-01M — F-UJI: 'Metadata includes descriptive core elements to support data findability' · FsF-R1-01MD — F-UJI: 'Metadata specifies the content of the data'
“The datasets generated and/or analysed during the current study are available online at the following web links: https:// esbl. nhlbi. nih. gov/ Datab ases/ Kinase_ Logos/ https:// esbl. nhlbi. nih. gov/ Datab ases/ Kinase_ Logos/ Kinas eTree. html https:// esbl. nhlbi. nih. gov/ Datab ases/ Kinase_ Logos/ Kinas ePred ictor. html”
The statement gives a direct route to the data with no stated precondition such as registration, embargo, or request. [majority verdict 'yes' (4/5 passes agreed)]
RDA-A1.1-01D — 'Data is accessible through a free access protocol' · FsF-A1-01M — F-UJI: 'Metadata contains access level and access conditions of the data' · NSTC Desirable Characteristics of Data Repositories (2022) — 'Free and Easy Access'
Advisory · not in the published score
“The datasets generated and/or analysed during the current study are available online at the following web links: https:// esbl. nhlbi. nih. gov/ Datab ases/ Kinase_ Logos/ https:// esbl. nhlbi. nih. gov/ Datab ases/ Kinase_ Logos/ Kinas eTree. html https:// esbl. nhlbi. nih. gov/ Datab ases/ Kinase_ Logos/ Kinas ePred ictor. html”
The data availability statement provides URLs but does not label the access level with a standard term like 'open access' or 'freely available'. [majority verdict 'partial' (4/5 passes agreed)]
FsF-A1-01M — F-UJI: 'Metadata contains access level and access conditions of the data' · RDA-A1-01M — metadata contains information to enable the user to get access to the data · COAR Controlled Vocabularies — Access Rights v1.0 (open / embargoed / restricted / metadata-onl
The data are not sensitive human-subject data, so no gatekeeper is mentioned.
NIH Genomic Data Sharing Policy (NOT-OD-14-124) — controlled-access via a Data Access Committee · RDA-A1.2-01D — 'Data is accessible through an access protocol that supports authentication and · NIH DMS Policy Element 5 (NOT-OD-21-014) — Access, Distribution, or Reuse Considerations (conse
The paper does not state how long the data will be available or any retention commitment.
NIH DMS Plan Element 4 (NOT-OD-21-014) — Data Preservation, Access, and Associated Timelines · NSTC Desirable Characteristics (2022), Organizational Infrastructure: 'Retention Policy' · RDA-A2-01M — 'Metadata is guaranteed to remain available after data is no longer available'
The paper does not specify the file format of the released data. [majority verdict 'no' (4/5 passes agreed)]
FsF-R1.3-02D — F-UJI: 'Data is available in a file format recommended by the target research co · RDA-R1.3-02D — data is expressed in a machine-understandable community standard · RDA-I1-01D — data uses a knowledge representation expressed in a standardised format
Advisory · not in the published score
No data or metadata community standard (e.g., MIAME, BIDS, GO) is named in the paper.
RDA-R1.3-01M — 'Metadata complies with a community standard' (priority Essential) · RDA-R1.3-01D — 'Data complies with a community standard' · RDA-I2-01M — '(Meta)data use vocabularies that follow FAIR principles'
No identifier (DOI, accession, etc.) is given for any external resource used; only citations by number are provided.
RDA-I3-01M — '(meta)data include references to other (meta)data' · RDA-I3-03M — 'metadata includes qualified references to other metadata' · FsF-I3-01M — F-UJI: 'Metadata includes links between the data and its related entities'
“The Creative Commons Public Domain Dedication waiver (http:// creat iveco mmons. org/ publi cdoma in/ zero/1. 0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.”
The data are licensed under CC0, an open standard licence. [majority verdict 'yes' (3/5 passes agreed)]
RDA-R1.1-01M — 'Metadata includes information about the licence under which the data can be reu · RDA-R1.1-02M — 'Metadata refers to a standard reuse licence' · RDA-R1.1-03M — 'Metadata refers to a machine-understandable reuse licence'
No version token or date is provided to identify the snapshot of the data.
DataCite Metadata Schema 4.6 — the 'Version' property · RDA-R1.2-01M — provenance information (which version was used is provenance) · NSTC Desirable Characteristics of Data Repositories (2022) — 'Provenance', 'Retention Policy'
“The Python source code is also made available on the same page (https:// esbl. nhlbi. nih. gov/ Datab ases/ Kinase_ Logos/ Kinas ePred ictor. html).”— not found in the paper; verdict downgraded
The code location is a lab website URL, not a versioned archive or code forge repository. [downgraded to 'no' — no verifiable quote from the paper] [majority verdict 'no' (3/5 passes agreed)]
NIH DMS Policy Element 2 (NOT-OD-21-014) — 'Related Tools, Software and/or Code' · FAIR4RS Principles v1.0 (Chue Hong et al., 2022; RDA/FORCE11/ReSA) — FAIR Principles for Resear · FORCE11 Software Citation Principles (Smith, Katz & Niemeyer, 2016, PeerJ CS 2:e86)
“The work was funded by the Division of Intramural Research, National Heart, Lung, and Blood Institute (NHLBI project ZIA‑HL001285 and ZIA‑HL006129, M.A.K.).”
Award numbers (ZIA-HL001285, ZIA-HL006129) are provided for the funding.
DataCite Metadata Schema 4.6 — 'FundingReference' property (funderName, funderIdentifier, award · Crossref Funder Registry — canonical funder identifiers for funding metadata · RDA-F2-01M — rich metadata provided to allow discovery (funding is part of the descriptive reco
Advisory · not in the published score
“PTM-Logo software was used with these data to generate position‑dependent Shannon information matrices and sequence motif ‘logos’.”— not found in the paper; verdict downgraded
The paper names specific tools and software used to generate the data. [downgraded to 'partial' — no verifiable quote from the paper] [majority verdict 'partial' (4/5 passes agreed)]
RDA-R1.2-01M — 'Metadata includes provenance information according to community- specific standa · FsF-R1.2-01M — F-UJI: 'Metadata includes provenance information about data creation or generati · W3C PROV-O (W3C Recommendation, 2013) — the entity/activity/agent model of provenance
“A complete PDF file of all logos can be accessed in Data Supplement 1.”— not found in the paper; verdict downgraded
A documentation object (PDF of logos) is provided as supplementary material, not shipped with the data. [downgraded to 'no' — no verifiable quote from the paper]
RDA-R1-01M — '(Meta)data are richly described with a plurality of accurate and relevant attribu · FsF-R1-01MD — F-UJI: 'Metadata specifies the content of the data' · NIH DMS Policy Element 3 (NOT-OD-21-014) — Standards (documentation and metadata to accompany t
Calibrated FAIR score — a parallel quality metric, independent of the DataRank citation score. See the full evaluation →
Base Score Contribution
0.416
From this paper's citation signal
Citation Network Contribution
0.168
From 10 citing papers with measurable signal
Ranked by each citer's contribution to N(p) — log1p(Cq) divided by its reference count — out of 13 citers.
Intramural NIH HHS
Grant: ZIA HL006129
Intramural NIH HHS
Grant: ZIA HL001285
National Institutes of Health
FWCI
3.12
Citation Percentile
0.9%
Citation Trend
Fields of Study
MeSH Terms
Keywords