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Bacon: a comprehensive computational benchmarking framework for evaluating targeted chromatin conformation capture-specific methodologies

Genome biology(2022)10.1186/s13059-021-02597-4Source: DataRank Database

Bacon: a comprehensive computational benchmarking framework for evaluating targeted chromatin conformation capture-specific methodologies is a research paper published in Genome biology (2022). On theSindex it has a DataRank of 0. It has been cited 10 times.

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Open Access10 citations

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›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (3 grants)Impact (FWCI 0.71)OA: goldTopics (36)Linked Datasets (10)DataCite Reuse (10)IDs (PubMed, PMC, OpenAlex)Annotations (2)

FAIR Checklist

Context only (not used in score)

Findable (2/2)

Has DOI
Indexed in repositories

Accessible (1/2)

Open Access

Interoperable (2/2)

DataCite relations
Linked datasets

Reusable (0/3)

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Authors (4)

Matthew C. Hill ORCID,Patrick T. Ellinor ORCID,Min Li ORCID,Li Tang ORCID

Live enrichment

PubMed:35063001 PMC:PMC8780810 OpenAlex:https://openalex.org/W4206117554

National Natural Science Foundation of China

Grant: No. 61732009

NHLBI NIH HHS

Grant: T32 HL007208

National Institutes of Health

Grant: 5T32HL007208-42

Integrated, Multidisciplinary Training in Cardiovascular Research

FWCI

0.71

Citation Percentile

0.6%

Citation Trend

2022

2023

2024

2025

2026

goldLicense: cc-by

journalhttps://genomebiology.biomedcentral.com/counter/pdf/10.1186/s13059-021-02597-4

publisherhttps://genomebiology.biomedcentral.com/counter/pdf/10.1186/s13059-021-02597-4

publisherhttps://link.springer.com/content/pdf/10.1186/s13059-021-02597-4.pdf

publisherhttps://link.springer.com/article/10.1186/s13059-021-02597-4/fulltext.html

journalhttps://doi.org/10.1186/s13059-021-02597-4

Fields of Study

Genomics and Chromatin DynamicsRNA Research and SplicingRNA and protein synthesis mechanisms0206 medical engineering02 engineering and technology

MeSH Terms

Pork MeatChromatin Immunoprecipitation SequencingChromatinChromosomesBenchmarking

Keywords

BenchmarkingExpansiveBenchmark (surveying)Computer scienceComputational biologyChromatinBiologyRange (aeronautics)Data scienceMachine learningData miningEngineeringGeneticsGeneLoopingBenchmarkChia-petChromatin TopologyHichipQH301-705.5MethodQH426-470ChromosomesPork MeatChromatin Immunoprecipitation SequencingBiology (General)

Additional file 1 of Bacon: a comprehensive computational benchmarking framework for evaluating targeted chromatin conformation capture-specific methodologies

10.6084/m9.figshare.18864821.v1figshare

Additional file 1 of Bacon: a comprehensive computational benchmarking framework for evaluating targeted chromatin conformation capture-specific methodologies

10.6084/m9.figshare.18864821figshare

Additional file 5 of Bacon: a comprehensive computational benchmarking framework for evaluating targeted chromatin conformation capture-specific methodologies

10.6084/m9.figshare.18864833.v1figshare

Additional file 5 of Bacon: a comprehensive computational benchmarking framework for evaluating targeted chromatin conformation capture-specific methodologies

10.6084/m9.figshare.18864833figshare

Additional file 4 of Bacon: a comprehensive computational benchmarking framework for evaluating targeted chromatin conformation capture-specific methodologies

10.6084/m9.figshare.18864830figshare

Additional file 3 of Bacon: a comprehensive computational benchmarking framework for evaluating targeted chromatin conformation capture-specific methodologies

10.6084/m9.figshare.18864827.v1figshare

Additional file 3 of Bacon: a comprehensive computational benchmarking framework for evaluating targeted chromatin conformation capture-specific methodologies

10.6084/m9.figshare.18864827figshare

Additional file 2 of Bacon: a comprehensive computational benchmarking framework for evaluating targeted chromatin conformation capture-specific methodologies

10.6084/m9.figshare.18864824.v1figshare

Additional file 2 of Bacon: a comprehensive computational benchmarking framework for evaluating targeted chromatin conformation capture-specific methodologies

10.6084/m9.figshare.18864824figshare

Additional file 4 of Bacon: a comprehensive computational benchmarking framework for evaluating targeted chromatin conformation capture-specific methodologies

10.6084/m9.figshare.18864830.v1figshare

Bacon: a comprehensive computational benchmarking framework for evaluating targeted chromatin conformation capture-specific methodologies

FAIR Checklist

Authors (4)

Funding (3 grants)

Impact

Open Access

Topics

Linked Datasets (10)

Annotations (Europe PMC)