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LABS: linear amplification-based bisulfite sequencing for ultrasensitive cancer detection from cell-free DNA

Genome biology(2024)10.1186/s13059-024-03262-2Source: DataRank Database

LABS: linear amplification-based bisulfite sequencing for ultrasensitive cancer detection from cell-free DNA is a research paper published in Genome biology (2024). On theSindex it has a DataRank of 0. It has been cited 10 times.

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0DataRank · unranked

Scored on demand from live citation data

Open Access10 citations

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Linked data & code

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›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (12 grants)Impact (FWCI 1.91)OA: goldTopics (65)IDs (PubMed, PMC, OpenAlex)Annotations (1)SDGs (2)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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Authors (29)

Ji Nie ORCID,Houxiang Zhu,Krissana Kowitwanich,Alana V. Beadell ORCID,Diana C. West-Szymanski ORCID

Live enrichment

PubMed:38877540 PMC:PMC11177480 OpenAlex:https://openalex.org/W4399684895

Foundation for the National Institutes of Health

Grant: R01 HG006827

Foundation for the National Institutes of Health

Grant: R33 CA269100

Foundation for the National Institutes of Health

Grant: R01 GM126553

Foundation for the National Institutes of Health

Grant: R01 HG011883

Foundation for the National Institutes of Health

Grant: U01 CA217078

NHGRI NIH HHS

Grant: R01 HG012927

National Institutes of Health

Grant: 5R01HG006827-14

Labeling and sequencing of 5hmC and 5mC in DNA-Renewal

National Institutes of Health

Grant: 5U01CA217078-03

Development of 5hmC and 5mC biomarkers in cell-free circulating DNA for sensitive colon cancer detection and prognosis

National Institutes of Health

Grant: 5R01GM126553-08

New directions in single cell genomics method development

National Institutes of Health

Grant: 1R33CA269100-01

A highly sensitive linear amplification based DNA methylation profiling technique for clinical cancer research

National Science Foundation

Grant: 2016307

Statistical Methods for Intra-Tumor Heterogeneity Studies Using Sequencing Data

National Institutes of Health

Grant: 5R01HG011883-04

Developing new computational tools for spatial transcriptomics data

FWCI

1.91

Citation Percentile

0.9%

Citation Trend

2024

2025

2026

goldLicense: cc-by

journalhttps://doi.org/10.1186/s13059-024-03262-2

GOLDhttps://doi.org/10.1186/s13059-024-03262-2

publisherhttps://doi.org/10.1186/s13059-024-03262-2

publisherhttps://link.springer.com/content/pdf/10.1186/s13059-024-03262-2.pdf

publisherhttps://link.springer.com/article/10.1186/s13059-024-03262-2/fulltext.html

Fields of Study

Epigenetics and DNA MethylationCancer Genomics and DiagnosticsSingle-cell and spatial transcriptomicsMedicine0301 basic medicine0303 health sciences03 medical and health sciencesHumansNeoplasmsDNA MethylationSequence Analysis, DNASulfitesCell-Free Nucleic AcidsNucleic Acid Amplification TechniquesDNA Copy Number VariationsDNA, NeoplasmCirculating Tumor DNA

MeSH Terms

Cell-Free Nucleic AcidsCirculating Tumor DNADNA, NeoplasmHumansNeoplasmsSulfitesSequence Analysis, DNADNA MethylationNucleic Acid Amplification TechniquesDNA Copy Number Variations

Keywords

BiologyBisulfite sequencingBisulfiteDNAMultiple displacement amplificationComputational biologyDNA sequencingMethylated DNA immunoprecipitationDNA methylationGenomeCancerMolecular biologySingle cell sequencingCell-free fetal DNAPolymerase chain reactionGeneticsGeneDNA extractionMutationExome sequencingGene expressionCancer DetectionCell-free DnaLow-input DnaLinear AmplificationDNA Copy Number VariationsQH301-705.5MethodSequence Analysis, DNADNA, NeoplasmQH426-470Circulating Tumor DNANeoplasmsHumansSulfitesBiology (General)Cell-Free Nucleic AcidsNucleic Acid Amplification Techniques

Sustainable Development Goals

SDG 3: 3. Good healthSDG 0: Good health and well-being