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Gut Analysis Toolbox – automating quantitative analysis of enteric neurons

Journal of Cell Science(2024)10.1242/jcs.261950Source: DataRank Database

Gut Analysis Toolbox – automating quantitative analysis of enteric neurons is a research paper published in Journal of Cell Science (2024). On theSindex it has a DataRank of 0. It has been cited 5 times.

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Open Access5 citations

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›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

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Enrichment:Funding (23 grants)Impact (FWCI 2.16)OA: hybridTopics (34)Linked Datasets (5)DataCite Reuse (5)IDs (PubMed, PMC, OpenAlex)Annotations (1)SDGs (1)

FAIR Checklist

Context only (not used in score)

Findable (2/2)

Has DOI
Indexed in repositories

Accessible (1/2)

Open Access

Interoperable (2/2)

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Linked datasets

Reusable (0/3)

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Authors (23)

Adam Humenick,Sabrina Poon ORCID,Myat Noe Han ORCID,Narges Mahdavian ORCID,Matthew C. Rowe

Live enrichment

PubMed:39219476 PMC:PMC11698042 OpenAlex:https://openalex.org/W4402138593

Horizon Europe

Grant: 101057970-AI4LIFE

National Institutes of Health

Grant: 1OT2OD24899

National Health and Medical Research Council

Grant: APP2021163

Australian Research Council

Grant: DE200100825

Discovery Early Career Researcher Award - Grant ID: DE200100825

Australian Research Council

Grant: FT220100617

ARC Future Fellowships - Grant ID: FT220100617

National Health and Medical Research Council

Grant: 2021675

European Molecular Biology Organization

Grant: EMBO ALTF 174-2022

National Health and Medical Research Council

Grant: GNT1197245

National Health and Medical Research Council

Grant: GNT1183420

NIH HHS

Grant: OT2 OD024899

European Commission

Grant: 101057970

Artificial Intelligence for Image Data Analysis in the Life Sciences

National Health and Medical Research Council (NHMRC)

Grant: 1197245

Protecting the Gut: A Novel Therapeutic Avenue for Reducing the Damaging Consequences of Obesity

National Institutes of Health

Grant: 3OT2OD024899-01S2

Comprehensive Structural and Functional Mapping of Mammalian Colonic Nervous System

Australian Government

EMBO

Monash University

Fundação Calouste Gulbenkian

National Insitutes of Health

Australian Government Research Training Program (RTP)

Melbourne Research Scholarship, University of Melbourne

European Research Council

Calouste Gulbenkian Foundation

University of Melbourne

FWCI

2.16

Citation Percentile

0.9%

Citation Trend

2024

2025

2026

hybridLicense: cc-by

journalhttps://journals.biologists.com/jcs/article-pdf/doi/10.1242/jcs.261950/3563150/jcs261950.pdf

publisherhttps://journals.biologists.com/jcs/article-pdf/doi/10.1242/jcs.261950/3563150/jcs261950.pdf

journalhttps://doi.org/10.1242/jcs.261950

repositoryhttps://pubmed.ncbi.nlm.nih.gov/39219476

repositoryhttps://www.ncbi.nlm.nih.gov/pmc/articles/11698042

Fields of Study

Congenital gastrointestinal and neural anomaliesGastrointestinal motility and disordersGut microbiota and health

MeSH Terms

Deep LearningAnimalsImage Processing, Computer-AssistedNeuronsSoftwareEnteric Nervous SystemGastrointestinal TractMice

Keywords

BiologyEnteric nervous systemToolboxSegmentationComputational biologyNeuroscienceArtificial intelligencePattern recognition (psychology)Computer scienceImage analysisSpatial analysisFijiMachine LearningGut Analysis ToolboxNeuronsTools and Resources1307 Cell BiologyGastrointestinal TractMiceDeep LearningImage Processing, Computer-AssistedAnimalsSoftware

Sustainable Development Goals

SDG 0: Partnerships for the goals

Gut Analysis Toolbox: Training data and 2D models for segmenting enteric neurons, neuronal subtypes and ganglia

10.5281/zenodo.6094887Zenodo

Gut Analysis Toolbox: Training data and 2D models for segmenting enteric neurons, neuronal subtypes and ganglia

10.5281/zenodo.10460434Zenodo

Gut Analysis Toolbox: Training data and 2D models for segmenting enteric neurons, neuronal subtypes and ganglia

10.5281/zenodo.15314214Zenodo

Gut Analysis Toolbox: Data and code associated with JCS manuscript

10.5281/zenodo.13932357Zenodo

Gut Analysis Toolbox: Data and code associated with JCS manuscript

10.5281/zenodo.13932358Zenodo