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Micro-dissection and integration of long and short reads to create a robust catalog of kidney compartment-specific isoforms

PLoS Computational Biology(2022)10.1371/journal.pcbi.1010040Source: DataRank Database

Micro-dissection and integration of long and short reads to create a robust catalog of kidney compartment-specific isoforms is a research paper published in PLoS Computational Biology (2022). On theSindex it has a DataRank of 0. It has been cited 3 times.

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Open Access3 citations

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Enrichment:Funding (3 grants)Impact (FWCI 0.24)OA: goldTopics (37)IDs (PubMed, PMC, OpenAlex)Annotations (1)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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Authors (10)

Ridvan Eksi ORCID,Daiyao Yi,Bradley Godfrey ORCID,Lisa R. Mathew ORCID,Christopher L. O’Connor ORCID

Live enrichment

PubMed:35468141 PMC:PMC9037928 OpenAlex:https://openalex.org/W4225543937

National Institutes of Health

Grant: R35GM133346

National Science Foundation

Grant: 1452656

CAREER: On-line Service for Predicting Protein Phosphorylation Dynamics Under Unseen Perturbations

National Institutes of Health

Grant: 3R35GM133346-05S1

Machine Learning for Drug Response Prediction

FWCI

0.24

Citation Percentile

0.5%

Citation Trend

2024

2025

goldLicense: cc-by

journalhttps://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1010040&type=printable

publisherhttps://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1010040&type=printable

publisherhttps://dx.plos.org/10.1371/journal.pcbi.1010040

journalhttps://doi.org/10.1371/journal.pcbi.1010040

repositoryhttps://pubmed.ncbi.nlm.nih.gov/35468141

Fields of Study

Renal and related cancersSingle-cell and spatial transcriptomicsEpigenetics and DNA Methylation0301 basic medicine03 medical and health sciences0206 medical engineering02 engineering and technologyGene Expression ProfilingHigh-Throughput Nucleotide SequencingHumansKidneyProtein IsoformsRNA, Messenger

MeSH Terms

HumansKidneyRNA, MessengerProtein IsoformsGene Expression ProfilingHigh-Throughput Nucleotide Sequencing

Keywords

Gene isoformComputational biologyBiologyCompartment (ship)Complementary DNAKidneyRNABioinformaticsGeneGeneticsQH301-705.5Gene Expression ProfilingHigh-Throughput Nucleotide SequencingHumansProtein IsoformsRNA, MessengerBiology (General)Research Article

Micro-dissection and integration of long and short reads to create a robust catalog of kidney compartment-specific isoforms

FAIR Checklist

Authors (10)

Funding (3 grants)

Impact

Open Access

Topics

Annotations (Europe PMC)