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Genome-Wide Profiling of DNA Methylation Reveals a Class of Normally Methylated CpG Island Promoters

PLoS Genetics(2007)10.1371/journal.pgen.0030181Source: DataRank Database

Genome-Wide Profiling of DNA Methylation Reveals a Class of Normally Methylated CpG Island Promoters is a research paper published in PLoS Genetics (2007). On theSindex it has a DataRank of 13.1. It has been cited 397 times, with 200 citing works in its 1-hop citation network.

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13.1DataRank · unranked

Scored on demand from live citation data

397 citations · 200 citing works in its network

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Enrichment:Funding (6 grants)Impact (FWCI 13.84)OA: goldTopics (63)Linked Datasets (25)DataCite Reuse (25)IDs (PubMed, PMC, OpenAlex)Annotations (1)SDGs (1)

FAIR Checklist

Context only (not used in score)

Findable (2/2)

Has DOI
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Accessible (0/2)

Interoperable (2/2)

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Reusable (0/3)

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DataRank Breakdown

Base Score 7%Citation Network 93%

Base Score Contribution

0.898

From this paper's citation signal

Citation Network Contribution

12.2

From 200 citing papers with measurable signal

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Authors (10)

Yutaka Kondo,Yi Guo,Jiexin Zhang ORCID,Li Zhang ORCID,Saira Ahmed

Live enrichment

PubMed:17967063 PMC:PMC2041996 OpenAlex:https://openalex.org/W2116993454

NCI NIH HHS

Grant: R01 CA 105346

NCI NIH HHS

Grant: P50 CA100632

NCI NIH HHS

Grant: R01 CA098006

National Institutes of Health

Grant: 5R01CA098006-04

DNA Methylation in Colon Cancer Metastasis

National Institutes of Health

Grant: 3P50CA100632-06S1

University of Texas M.D. Anderson Cancer Center SPORE - Leukemia

National Institutes of Health

Grant: 1R01CA105346-01

Diet and DNA methylation in colon mucosa and adenomas

FWCI

13.84

Citation Percentile

1.0%

Citation Trend

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goldLicense: cc-by

journalhttps://journals.plos.org/plosgenetics/article/file?id=10.1371/journal.pgen.0030181&type=printable

publisherhttps://journals.plos.org/plosgenetics/article/file?id=10.1371/journal.pgen.0030181&type=printable

publisherhttps://dx.plos.org/10.1371/journal.pgen.0030181

journalhttps://doi.org/10.1371/journal.pgen.0030181

repositoryhttps://pubmed.ncbi.nlm.nih.gov/17967063

Fields of Study

Epigenetics and DNA MethylationCancer-related gene regulationGenetic Syndromes and Imprinting0301 basic medicine03 medical and health sciences

MeSH Terms

Base SequenceDNA (Cytosine-5-)-MethyltransferasesFemaleHumansHydroxamic AcidsLymphocytesMaleMolecular Sequence DataNeoplasmsPromoter Regions, GeneticTranscription, GeneticTranscriptional ActivationGenome, HumanGene Expression Regulation, NeoplasticSequence Analysis, DNACpG IslandsDNA MethylationOligonucleotide Array Sequence AnalysisGene SilencingGene Expression ProfilingCell Line, TumorGenes, Neoplasm

Keywords

BiologyCpG siteDNA methylationDifferentially methylated regionsEpigenetics of physical exerciseMethylationIllumina Methylation AssayPromoterMethylated DNA immunoprecipitationRNA-Directed DNA MethylationBisulfite sequencingGeneGeneticsMolecular biologyGene expressionMaleBase SequenceGenome, HumanGene Expression ProfilingMolecular Sequence DataSequence Analysis, DNAQH426-470Hydroxamic AcidsGene Expression Regulation, NeoplasticCell Line, TumorNeoplasmsHumansCpG IslandsFemaleDNA (Cytosine-5-)-MethyltransferasesGene SilencingLymphocytesPromoter Regions, GeneticResearch ArticleGenes, NeoplasmOligonucleotide Array Sequence Analysis

Sustainable Development Goals

SDG 0: Life below water

Additional file 1 of Functional characterization of age-dependent p16 epimutation reveals biological drivers and therapeutic targets for colorectal cancer

10.6084/m9.figshare.22767401.v1figshare

Additional file 1 of Functional characterization of age-dependent p16 epimutation reveals biological drivers and therapeutic targets for colorectal cancer

10.6084/m9.figshare.22767401figshare

Additional file 2 of Functional characterization of age-dependent p16 epimutation reveals biological drivers and therapeutic targets for colorectal cancer

10.6084/m9.figshare.22767404.v1figshare

Additional file 2 of Functional characterization of age-dependent p16 epimutation reveals biological drivers and therapeutic targets for colorectal cancer

10.6084/m9.figshare.22767404figshare

Additional file 1 of Cross-tissue patterns of DNA hypomethylation reveal genetically distinct histories of cell development

10.6084/m9.figshare.24406640.v1figshare

Additional file 1 of Cross-tissue patterns of DNA hypomethylation reveal genetically distinct histories of cell development

10.6084/m9.figshare.24406640figshare

Additional file 2 of Cross-tissue patterns of DNA hypomethylation reveal genetically distinct histories of cell development

10.6084/m9.figshare.24406916.v1figshare

Additional file 2 of Cross-tissue patterns of DNA hypomethylation reveal genetically distinct histories of cell development

10.6084/m9.figshare.24406916figshare

Additional file 3 of Cross-tissue patterns of DNA hypomethylation reveal genetically distinct histories of cell development

10.6084/m9.figshare.26629036.v1figshare

Additional file 3 of Cross-tissue patterns of DNA hypomethylation reveal genetically distinct histories of cell development

10.6084/m9.figshare.26629036figshare

Additional file 4 of Cross-tissue patterns of DNA hypomethylation reveal genetically distinct histories of cell development

10.6084/m9.figshare.26629039.v1figshare

Additional file 4 of Cross-tissue patterns of DNA hypomethylation reveal genetically distinct histories of cell development

10.6084/m9.figshare.26629039figshare

Additional file 5 of Cross-tissue patterns of DNA hypomethylation reveal genetically distinct histories of cell development

10.6084/m9.figshare.26629042.v1figshare

Additional file 5 of Cross-tissue patterns of DNA hypomethylation reveal genetically distinct histories of cell development

10.6084/m9.figshare.26629042figshare

Additional file 6 of Cross-tissue patterns of DNA hypomethylation reveal genetically distinct histories of cell development

10.6084/m9.figshare.26629045.v1figshare

Additional file 6 of Cross-tissue patterns of DNA hypomethylation reveal genetically distinct histories of cell development

10.6084/m9.figshare.26629045figshare

Additional file 7 of Cross-tissue patterns of DNA hypomethylation reveal genetically distinct histories of cell development

10.6084/m9.figshare.26629048.v1figshare

Additional file 7 of Cross-tissue patterns of DNA hypomethylation reveal genetically distinct histories of cell development

10.6084/m9.figshare.26629048figshare

Additional file 8 of Cross-tissue patterns of DNA hypomethylation reveal genetically distinct histories of cell development

10.6084/m9.figshare.26629051.v1figshare

Additional file 8 of Cross-tissue patterns of DNA hypomethylation reveal genetically distinct histories of cell development

10.6084/m9.figshare.26629051figshare

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Genome-Wide Profiling of DNA Methylation Reveals a Class of Normally Methylated CpG Island Promoters

FAIR Checklist

DataRank Breakdown

Authors (10)

Funding (6 grants)

Impact

Open Access

Topics

Linked Datasets (25)

Annotations (Europe PMC)

Related Papers (10)