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Phylogenomics of 8,839 Clostridioides difficile genomes reveals recombination-driven evolution and diversification of toxin A and B

PLoS Pathogens(2020)10.1371/journal.ppat.1009181Source: DataRank Database

Phylogenomics of 8,839 Clostridioides difficile genomes reveals recombination-driven evolution and diversification of toxin A and B is a research paper published in PLoS Pathogens (2020). On theSindex it has a DataRank of 0. It has been cited 80 times.

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Open Access80 citations

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Enrichment:Funding (19 grants)Impact (FWCI 0.80)OA: goldTopics (54)IDs (PubMed, PMC, OpenAlex)Annotations (3)SDGs (2)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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Authors (9)

Benjamin J.-M. Tremblay ORCID,Ji Zeng ORCID,Xin Wei ORCID,Harold Hodgins,Jay Worley ORCID

Live enrichment

PubMed:33370413 PMC:PMC7853461 OpenAlex:https://openalex.org/W3115199828

Natural Sciences and Engineering Research Council of Canada

Grant: RGPIN-2019-04266

Natural Sciences and Engineering Research Council of Canada

Grant: RGPAS-2019-00004

National Institute of Allergy and Infectious Diseases

Grant: R01AI132387

National Institute of Allergy and Infectious Diseases

Grant: R01AI139087

National Institutes of Health

Grant: P30 DK034854

Boston Children’s Hospital Intellectual and Developmental Disabilities Research Center

Grant: P30HD18655

NICHD NIH HHS

Grant: P30 HD018655

National Institutes of Health

Grant: 5P30DK034854-32

Integrated Epithelial and Mucosal Biology

National Institutes of Health

Grant: 3P30HD018655-28S1

Mental Retardation and Developmental Disabilities Research Centers 2006

National Institutes of Health

Grant: 5R01AI139087-04

Structure and Function of C. Difficile Toxins

Natural Sciences and Engineering Research Council of Canada

Grant: unidentified

unidentified

National Institutes of Health

Grant: 5P30HD018655-21

CORE--MOLECULAR GENETICS FACILITY

National Institutes of Health

Grant: 5P30DK034854-17

CORE--IMMUNOLOGY AND MICROBIOLOGY

National Institutes of Health

Grant: 5R01AI132387-02

Molecular basis of action and pathogenesis of Clostridium difficile toxin B

Intramural Research Program of the National Library of Medicine, NIH

Brigham and Women’s Hospital Precision Medicine Institute

Burroughs Wellcome Fund - Investigator in the Pathogenesis of Infectious Disease award

Government of Ontario

Hatch Family Foundation

FWCI

0.80

Citation Percentile

0.8%

Citation Trend

2021

2022

2023

2024

2025

2026

goldLicense: cc-by

journalhttps://journals.plos.org/plospathogens/article/file?id=10.1371/journal.ppat.1009181&type=printable

publisherhttps://journals.plos.org/plospathogens/article/file?id=10.1371/journal.ppat.1009181&type=printable

publisherhttps://dx.plos.org/10.1371/journal.ppat.1009181

journalhttps://doi.org/10.1371/journal.ppat.1009181

repositoryhttps://pubmed.ncbi.nlm.nih.gov/33370413

Fields of Study

Clostridium difficile and Clostridium perfringens researchPharmacological Effects of Natural CompoundsHelicobacter pylori-related gastroenterology studies0301 basic medicine0303 health sciences03 medical and health sciences

MeSH Terms

Antigenic VariationBacterial ProteinsBacterial ToxinsEnterotoxinsHumansModels, MolecularPhylogenyProtein ConformationRecombination, GeneticGenetic VariationClostridioides difficileGenome, BacterialSequence Analysis, DNAEvolution, MolecularDatabases, Genetic

Keywords

Clostridium difficile toxin BBiologyClostridium difficile toxin AHomologous recombinationSubtypingGeneticsGenomeClostridium difficilePhylogenomicsGenePhylogeneticsVirologyAntibioticsModels, MolecularRecombination, GeneticQH301-705.5Clostridioides difficileProtein ConformationBacterial ToxinsGenetic VariationSequence Analysis, DNARC581-607Antigenic VariationEvolution, MolecularEnterotoxinsBacterial ProteinsDatabases, GeneticHumansImmunologic diseases. AllergyBiology (General)Genome, BacterialPhylogenyResearch Article

Sustainable Development Goals

SDG 3: 3. Good healthSDG 0: Good health and well-being

Phylogenomics of 8,839 Clostridioides difficile genomes reveals recombination-driven evolution and diversification of toxin A and B

FAIR Checklist

Authors (9)

Funding (19 grants)

Impact

Open Access

Topics

Annotations (Europe PMC)