A Parkinson's disease CircRNAs Resource reveals a link between circSLC8A1 and oxidative stress is a dataset published in EMBO Molecular Medicine (2020). On theSindex it has a DataRank of 3.3, placing it in the top 6.8% of the data-sharing corpus. It has been cited 150 times, with 100 citing works in its 1-hop citation network. Its calibrated FAIR score is 58/100.
Ranks in the top 7% for downstream scientific impact
Linked data & code
DataRank reads this dataset's downstream impact straight off the citation graph — no black box, no proprietary weighting. How is this computed?
FAIR checklist signals are shown for context only and do not affect DataRank scoring.
Full FAIR picture · advisory
The headline score is computed from the scored criteria — the fact-shaped checks (a repository, an accession, a licence) that two independent models agree on. The advisory criteria below are real FAIR guidance but rest on judgment calls that models read differently, so they inform without moving the number.
“The datasets produced in this study are available in the following databases: RNA‐seq data: Gene Expression Omnibus GSE133101 ( https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE133101 ).”
The accession GSE133101 is a GEO identifier, which is a recognized persistent identifier scheme.
RDA-F1-01D — FAIR Data Maturity Model: 'Data is identified by a persistent identifier' (priorit · RDA-F1-02D — FAIR Data Maturity Model: 'Data is identified by a globally unique identifier' · FsF-F1-02D — F-UJI/FAIRsFAIR: 'Data is assigned a persistent identifier'
“The datasets produced in this study are available in the following databases: RNA‐seq data: Gene Expression Omnibus GSE133101 ( https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE133101 ).”
Gene Expression Omnibus (GEO) is a named data repository.
RDA-F4-01M — FAIR Data Maturity Model: metadata is offered so it can be harvested and indexed ( · NIH DMS Policy Element 4 (NOT-OD-21-014) — name the repository where data will be archived · NSTC Desirable Characteristics of Data Repositories (2022) — 'Long-Term Sustainability', 'Reten
“The datasets produced in this study are available in the following databases: RNA‐seq data: Gene Expression Omnibus GSE133101 ( https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE133101 ).”
The dataset identifier appears only in the body text (Data Availability section), not in the reference list.
FORCE11 Joint Declaration of Data Citation Principles (2014) — data should be cited as a first- · RDA-F3-01M — metadata clearly and explicitly includes the identifier of the data it describes · FsF-F3-01M — F-UJI: 'Metadata includes the identifier of the data it describes'
Advisory · not in the published score
“The datasets produced in this study are available in the following databases: RNA‐seq data: Gene Expression Omnibus GSE133101 ( https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE133101 ).”
The statement points to a repository record with an accession (GSE133101), matching Colavizza category 3.
Colavizza, Hrynaszkiewicz, Staden, Whitaker & McGillivray (2020), 'The citation advantage of li · Springer Nature research data policy — Data Availability Statements: standard statement templat · RDA-F3-01M — metadata clearly and explicitly includes the identifier of the data it describes
“We sequenced these libraries at a deep level (50 M reads per sample on average; Fig EV1 I, Dataset EV2 )”
The paper describes the dataset's size and content in running prose but does not provide an itemised inventory or section listing files or variables. [majority verdict 'partial' (3/5 passes agreed)]
RDA-F2-01M — 'Rich metadata is provided to allow discovery' (priority Essential) · FsF-F2-01M — F-UJI: 'Metadata includes descriptive core elements to support data findability' · FsF-R1-01MD — F-UJI: 'Metadata specifies the content of the data'
“The datasets produced in this study are available in the following databases: RNA‐seq data: Gene Expression Omnibus GSE133101 ( https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE133101 ).”
The data are stated to be available in GEO with no precondition such as embargo, registration, or application.
RDA-A1.1-01D — 'Data is accessible through a free access protocol' · FsF-A1-01M — F-UJI: 'Metadata contains access level and access conditions of the data' · NSTC Desirable Characteristics of Data Repositories (2022) — 'Free and Easy Access'
Advisory · not in the published score
“The datasets produced in this study are available in the following databases: RNA‐seq data: Gene Expression Omnibus GSE133101 ( https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE133101 ).”
The paper describes the action of availability at GEO but does not apply an explicit access-level label such as 'open access'. [majority verdict 'partial' (4/5 passes agreed)]
FsF-A1-01M — F-UJI: 'Metadata contains access level and access conditions of the data' · RDA-A1-01M — metadata contains information to enable the user to get access to the data · COAR Controlled Vocabularies — Access Rights v1.0 (open / embargoed / restricted / metadata-onl
“Informed consent was obtained from all subjects or their care takers to ensure that the experiment conformed to the principles set out in the WMA Declaration of Helsinki and the Department of Health and Human Services Belmont Report. At the Hebrew University, performing of this study had been approved by the Committee for Studies Involving human‐originated materials and tissues.”
The data are openly available in GEO with no gatekeeper; the ethics approval is not a data-access gatekeeper.
NIH Genomic Data Sharing Policy (NOT-OD-14-124) — controlled-access via a Data Access Committee · RDA-A1.2-01D — 'Data is accessible through an access protocol that supports authentication and · NIH DMS Policy Element 5 (NOT-OD-21-014) — Access, Distribution, or Reuse Considerations (conse
No sentence in the paper states how long the data will remain available or provides any persistence commitment. [majority verdict 'no' (4/5 passes agreed)]
NIH DMS Plan Element 4 (NOT-OD-21-014) — Data Preservation, Access, and Associated Timelines · NSTC Desirable Characteristics (2022), Organizational Infrastructure: 'Retention Policy' · RDA-A2-01M — 'Metadata is guaranteed to remain available after data is no longer available'
The paper does not name any file format for the released data.
FsF-R1.3-02D — F-UJI: 'Data is available in a file format recommended by the target research co · RDA-R1.3-02D — data is expressed in a machine-understandable community standard · RDA-I1-01D — data uses a knowledge representation expressed in a standardised format
Advisory · not in the published score
No community standard for data or metadata (e.g., MIAME, MINSEQE) is named in the paper.
RDA-R1.3-01M — 'Metadata complies with a community standard' (priority Essential) · RDA-R1.3-01D — 'Data complies with a community standard' · RDA-I2-01M — '(Meta)data use vocabularies that follow FAIR principles'
“hg38”— not found in the paper; verdict downgraded
The paper gives the genome assembly identifier 'hg38' (a qualified reference to the human reference genome) as a resource used in the analysis. [downgraded to 'no' — no verifiable quote from the paper] [majority verdict 'no' (4/5 passes agreed)]
RDA-I3-01M — '(meta)data include references to other (meta)data' · RDA-I3-03M — 'metadata includes qualified references to other metadata' · FsF-I3-01M — F-UJI: 'Metadata includes links between the data and its related entities'
The paper states a CC BY 4.0 license for the article but not for the data; no data license is mentioned.
RDA-R1.1-01M — 'Metadata includes information about the licence under which the data can be reu · RDA-R1.1-02M — 'Metadata refers to a standard reuse licence' · RDA-R1.1-03M — 'Metadata refers to a machine-understandable reuse licence'
No version token or date is provided for the dataset; the GEO accession alone does not identify a specific snapshot.
DataCite Metadata Schema 4.6 — the 'Version' property · RDA-R1.2-01M — provenance information (which version was used is provenance) · NSTC Desirable Characteristics of Data Repositories (2022) — 'Provenance', 'Retention Policy'
The paper does not provide a locator for the study's own code; it only references third-party pipelines.
NIH DMS Policy Element 2 (NOT-OD-21-014) — 'Related Tools, Software and/or Code' · FAIR4RS Principles v1.0 (Chue Hong et al., 2022; RDA/FORCE11/ReSA) — FAIR Principles for Resear · FORCE11 Software Citation Principles (Smith, Katz & Niemeyer, 2016, PeerJ CS 2:e86)
“the National Institutes of Health, Grant R01AG057700 (to SK)”
The paper provides a specific grant number (R01AG057700) attached to a named funder. [majority verdict 'yes' (4/5 passes agreed)]
DataCite Metadata Schema 4.6 — 'FundingReference' property (funderName, funderIdentifier, award · Crossref Funder Registry — canonical funder identifiers for funding metadata · RDA-F2-01M — rich metadata provided to allow discovery (funding is part of the descriptive reco
Advisory · not in the published score
“Ribo‐Zero GOLD Kit (epicenter)”
The paper names a specific kit (Ribo-Zero GOLD) used in library preparation. [majority verdict 'yes' (3/5 passes agreed)]
RDA-R1.2-01M — 'Metadata includes provenance information according to community- specific standa · FsF-R1.2-01M — F-UJI: 'Metadata includes provenance information about data creation or generati · W3C PROV-O (W3C Recommendation, 2013) — the entity/activity/agent model of provenance
No documentation object (README, codebook) is named as travelling with the data, and no variable-definition table exists inside the article. [majority verdict 'no' (4/5 passes agreed)]
RDA-R1-01M — '(Meta)data are richly described with a plurality of accurate and relevant attribu · FsF-R1-01MD — F-UJI: 'Metadata specifies the content of the data' · NIH DMS Policy Element 3 (NOT-OD-21-014) — Standards (documentation and metadata to accompany t
Calibrated FAIR score — a parallel quality metric, independent of the DataRank citation score. See the full evaluation →
Base Score Contribution
0.753
From this paper's citation signal
Citation Network Contribution
2.5
From 100 citing papers with measurable signal
Ranked by each citer's contribution to N(p) — log1p(Cq) divided by its reference count — out of 100 citers.
Michael J. Fox Foundation for Parkinson's Research
Grant: MJFF11183
Israeli Ministry of Science, Technology and Space
Grant: 53140
National Institutes of Health
Grant: R01AG057700
The Netherlands Brain Bank
Edmond and Lily Safra Center of Brain Sciences
Edmond and Lily Safra Center of Brain Sciences (ELSC)
The Netherlands Brain Bank (NBB)
Edmond and Lily Safra Center of Brain Sciences (ELSC)
The Netherlands Brain Bank (NBB)
FWCI
6.19
Citation Percentile
1.0%
Citation Trend
Fields of Study
MeSH Terms
Keywords
Sustainable Development Goals
Additional file 1 of The pyroptosis mediated biomarker pattern: an emerging diagnostic approach for Parkinson’s disease
Additional file 1 of The pyroptosis mediated biomarker pattern: an emerging diagnostic approach for Parkinson’s disease
Additional file 2 of The pyroptosis mediated biomarker pattern: an emerging diagnostic approach for Parkinson’s disease
Additional file 2 of The pyroptosis mediated biomarker pattern: an emerging diagnostic approach for Parkinson’s disease
Additional file 3 of The pyroptosis mediated biomarker pattern: an emerging diagnostic approach for Parkinson’s disease
Additional file 3 of The pyroptosis mediated biomarker pattern: an emerging diagnostic approach for Parkinson’s disease
Additional file 4 of The pyroptosis mediated biomarker pattern: an emerging diagnostic approach for Parkinson’s disease
Additional file 4 of The pyroptosis mediated biomarker pattern: an emerging diagnostic approach for Parkinson’s disease
Additional file 5 of The pyroptosis mediated biomarker pattern: an emerging diagnostic approach for Parkinson’s disease
Additional file 5 of The pyroptosis mediated biomarker pattern: an emerging diagnostic approach for Parkinson’s disease
Additional file 6 of The pyroptosis mediated biomarker pattern: an emerging diagnostic approach for Parkinson’s disease
Additional file 6 of The pyroptosis mediated biomarker pattern: an emerging diagnostic approach for Parkinson’s disease