A genome‐scale yeast library with inducible expression of individual genes is a dataset published in Molecular Systems Biology (2021). On theSindex it has a DataRank of 1.9, placing it in the top 11.3% of the data-sharing corpus. It has been cited 74 times, with 67 citing works in its 1-hop citation network. Its calibrated FAIR score is 60/100.
Ranks in the top 11% for downstream scientific impact
Linked data & code
DataRank reads this dataset's downstream impact straight off the citation graph — no black box, no proprietary weighting. How is this computed?
FAIR checklist signals are shown for context only and do not affect DataRank scoring.
Full FAIR picture · advisory
The headline score is computed from the scored criteria — the fact-shaped checks (a repository, an accession, a licence) that two independent models agree on. The advisory criteria below are real FAIR guidance but rest on judgment calls that models read differently, so they inform without moving the number.
“Next-generation sequencing and microarray data can be found at the Gene Expression Omnibus with accession number GSE158319: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE158319”
The dataset has a persistent identifier (GEO accession GSE158319).
RDA-F1-01D — FAIR Data Maturity Model: 'Data is identified by a persistent identifier' (priorit · RDA-F1-02D — FAIR Data Maturity Model: 'Data is identified by a globally unique identifier' · FsF-F1-02D — F-UJI/FAIRsFAIR: 'Data is assigned a persistent identifier'
“Gene Expression Omnibus”
The repository is named as Gene Expression Omnibus (GEO), a proper data repository.
RDA-F4-01M — FAIR Data Maturity Model: metadata is offered so it can be harvested and indexed ( · NIH DMS Policy Element 4 (NOT-OD-21-014) — name the repository where data will be archived · NSTC Desirable Characteristics of Data Repositories (2022) — 'Long-Term Sustainability', 'Reten
“Next-generation sequencing and microarray data can be found at the Gene Expression Omnibus with accession number GSE158319: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE158319”
The dataset identifier (GSE158319) appears only in the body text, not in the reference list.
FORCE11 Joint Declaration of Data Citation Principles (2014) — data should be cited as a first- · RDA-F3-01M — metadata clearly and explicitly includes the identifier of the data it describes · FsF-F3-01M — F-UJI: 'Metadata includes the identifier of the data it describes'
Advisory · not in the published score
“Next-generation sequencing and microarray data can be found at the Gene Expression Omnibus with accession number GSE158319: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE158319”
The DAS points to a repository record (GEO) with an accession number.
Colavizza, Hrynaszkiewicz, Staden, Whitaker & McGillivray (2020), 'The citation advantage of li · Springer Nature research data policy — Data Availability Statements: standard statement templat · RDA-F3-01M — metadata clearly and explicitly includes the identifier of the data it describes
“In total, we integrated a uniquely barcoded b-estradiol-regulated promoter in front of 4,668 non-essential genes and 1,022 essential genes in a heterozygous diploid background”
The dataset's content is described in running prose (numbers of genes) but not as an itemised inventory. [majority verdict 'partial' (4/5 passes agreed)]
RDA-F2-01M — 'Rich metadata is provided to allow discovery' (priority Essential) · FsF-F2-01M — F-UJI: 'Metadata includes descriptive core elements to support data findability' · FsF-R1-01MD — F-UJI: 'Metadata specifies the content of the data'
“Next-generation sequencing and microarray data can be found at the Gene Expression Omnibus with accession number GSE158319: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE158319”
The data are stated to be findable at a public repository (GEO) with no precondition.
RDA-A1.1-01D — 'Data is accessible through a free access protocol' · FsF-A1-01M — F-UJI: 'Metadata contains access level and access conditions of the data' · NSTC Desirable Characteristics of Data Repositories (2022) — 'Free and Easy Access'
Advisory · not in the published score
“Next-generation sequencing and microarray data can be found at the Gene Expression Omnibus with accession number GSE158319: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE158319”
The paper describes an action (can be found at GEO) but does not apply an explicit access-level label.
FsF-A1-01M — F-UJI: 'Metadata contains access level and access conditions of the data' · RDA-A1-01M — metadata contains information to enable the user to get access to the data · COAR Controlled Vocabularies — Access Rights v1.0 (open / embargoed / restricted / metadata-onl
The data are not sensitive or human-subject, so no gatekeeper is named or needed.
NIH Genomic Data Sharing Policy (NOT-OD-14-124) — controlled-access via a Data Access Committee · RDA-A1.2-01D — 'Data is accessible through an access protocol that supports authentication and · NIH DMS Policy Element 5 (NOT-OD-21-014) — Access, Distribution, or Reuse Considerations (conse
No statement about when the data are available or how long they persist.
NIH DMS Plan Element 4 (NOT-OD-21-014) — Data Preservation, Access, and Associated Timelines · NSTC Desirable Characteristics (2022), Organizational Infrastructure: 'Retention Policy' · RDA-A2-01M — 'Metadata is guaranteed to remain available after data is no longer available'
No file format is named for the released data (sequencing data formats are not mentioned). [majority verdict 'no' (4/5 passes agreed)]
FsF-R1.3-02D — F-UJI: 'Data is available in a file format recommended by the target research co · RDA-R1.3-02D — data is expressed in a machine-understandable community standard · RDA-I1-01D — data uses a knowledge representation expressed in a standardised format
Advisory · not in the published score
No data or metadata community standard is named as applied to the data. [majority verdict 'no' (4/5 passes agreed)]
RDA-R1.3-01M — 'Metadata complies with a community standard' (priority Essential) · RDA-R1.3-01D — 'Data complies with a community standard' · RDA-I2-01M — '(Meta)data use vocabularies that follow FAIR principles'
“Gene expression data from Gene Expression Omnibus (GSE 67218)”
The paper references an external dataset with an identifier (GSE67218) for E. coli data. [majority verdict 'yes' (3/5 passes agreed)]
RDA-I3-01M — '(meta)data include references to other (meta)data' · RDA-I3-03M — 'metadata includes qualified references to other metadata' · FsF-I3-01M — F-UJI: 'Metadata includes links between the data and its related entities'
The paper does not state a license for the data; the article license (CC BY) does not apply to the data.
RDA-R1.1-01M — 'Metadata includes information about the licence under which the data can be reu · RDA-R1.1-02M — 'Metadata refers to a standard reuse licence' · RDA-R1.1-03M — 'Metadata refers to a machine-understandable reuse licence'
No version token or date is given for the dataset; the GEO accession is a unique identifier but not a version.
DataCite Metadata Schema 4.6 — the 'Version' property · RDA-R1.2-01M — provenance information (which version was used is provenance) · NSTC Desirable Characteristics of Data Repositories (2022) — 'Provenance', 'Retention Policy'
“Platometer software: https://github.com/baryshnikova-lab/platometer”— not found in the paper; verdict downgraded
A machine-resolvable locator (GitHub URL) is provided for the study's own code. [downgraded to 'partial' — no verifiable quote from the paper] [majority verdict 'partial' (3/5 passes agreed)]
NIH DMS Policy Element 2 (NOT-OD-21-014) — 'Related Tools, Software and/or Code' · FAIR4RS Principles v1.0 (Chue Hong et al., 2022; RDA/FORCE11/ReSA) — FAIR Principles for Resear · FORCE11 Software Citation Principles (Smith, Katz & Niemeyer, 2016, PeerJ CS 2:e86)
“This work was funded by ... NIH grant RO1GM046406 (DB) ... and grants FDN- 143264 (CB) and FDN- 143265 (BJA) from the Canadian Institutes of Health Research.”— not found in the paper; verdict downgraded
The paper includes specific grant numbers (RO1GM046406, FDN-143264, FDN-143265) attached to named funders. [downgraded to 'partial' — no verifiable quote from the paper] [majority verdict 'partial' (3/5 passes agreed)]
DataCite Metadata Schema 4.6 — 'FundingReference' property (funderName, funderIdentifier, award · Crossref Funder Registry — canonical funder identifiers for funding metadata · RDA-F2-01M — rich metadata provided to allow discovery (funding is part of the descriptive reco
Advisory · not in the published score
“Samples were sequenced on the NovaSeq 6000”
The paper names specific instruments and software used to produce the data. [majority verdict 'yes' (4/5 passes agreed)]
RDA-R1.2-01M — 'Metadata includes provenance information according to community- specific standa · FsF-R1.2-01M — F-UJI: 'Metadata includes provenance information about data creation or generati · W3C PROV-O (W3C Recommendation, 2013) — the entity/activity/agent model of provenance
No documentation object (README, data dictionary) is named as travelling with the data. [majority verdict 'no' (4/5 passes agreed)]
RDA-R1-01M — '(Meta)data are richly described with a plurality of accurate and relevant attribu · FsF-R1-01MD — F-UJI: 'Metadata specifies the content of the data' · NIH DMS Policy Element 3 (NOT-OD-21-014) — Standards (documentation and metadata to accompany t
Calibrated FAIR score — a parallel quality metric, independent of the DataRank citation score. See the full evaluation →
Base Score Contribution
0.648
From this paper's citation signal
Citation Network Contribution
1.2
From 47 citing papers with measurable signal
Ranked by each citer's contribution to N(p) — log1p(Cq) divided by its reference count — out of 67 citers.
HHS | NIH | Office of Extramural Research, National Institutes of Health
Grant: RO1GM046406
Gouvernement du Canada | Canadian Institutes of Health Research
Grant: FDN‐143264
Gouvernement du Canada | Canadian Institutes of Health Research
Grant: FDN‐143265
CIHR
Grant: FDN-143264
NIGMS NIH HHS
Grant: R01 GM046406
CIHR
Grant: FDN-143265
Influential Citations
8
Fields of Study
MeSH Terms
Keywords