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Comparative chromatin accessibility upon BDNF stimulation delineates neuronal regulatory elements

Molecular Systems Biology(2022)10.15252/msb.202110473Source: DataRank Database

Comparative chromatin accessibility upon BDNF stimulation delineates neuronal regulatory elements is a research paper published in Molecular Systems Biology (2022). On theSindex it has a DataRank of 0.965. It has been cited 39 times, with 29 citing works in its 1-hop citation network.

N/A

0.965DataRank · unranked

Scored on demand from live citation data

Deposits data Open Access39 citations · 29 citing works in its network

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Linked data & code

gen uniprot

Data availability

Repositories this paper deposited data in (declared in PubMed).

GEOGSE166959

DataRank reads this dataset's downstream impact straight off the citation graph — no black box, no proprietary weighting. How is this computed?

›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (6 grants)Impact (FWCI 2.82)OA: goldTopics (45)Linked Datasets (8)DataCite Reuse (8)IDs (PubMed, PMC, OpenAlex)Annotations (2)SDGs (1)

FAIR Checklist

Context only (not used in score)

Findable (2/2)

Has DOI
Indexed in repositories

Accessible (1/2)

Open Access

Interoperable (2/2)

DataCite relations
Linked datasets

Reusable (0/3)

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DataRank Breakdown

Base Score 57%Citation Network 43%

Base Score Contribution

0.553

From this paper's citation signal

Citation Network Contribution

0.412

From 21 citing papers with measurable signal

Learn more about DataRank methodology →

Top 5 citers driving the network score

Ranked by each citer's contribution to N(p) — log1p(C_q) divided by its reference count — out of 29 citers.

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Oncogene202326 citations61 referencesContributes 0.054
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Nature202420 citations57 referencesContributes 0.053
Progranulin from different gliocytes in the nucleus accumbens exerts distinct roles in FTD- and neuroinflammation-induced depression-like behaviors
Journal of Neuroinflammation202221 citations80 referencesContributes 0.039
Neurotrophin signalling in the human nervous system
Frontiers in Molecular Neuroscience202345 citations101 referencesContributes 0.038
Hijacking of the nervous system in cancer: mechanism and therapeutic targets
Molecular Cancer202545 citations115 referencesContributes 0.033

Authors (12)

Vikram S. Ratnu,Lucia Gordillo ORCID,In‐Young Hwang ORCID,Luca Mariani ORCID,Kathryn Weinand ORCID

Live enrichment

PubMed:35996956 PMC:PMC9396287 OpenAlex:https://openalex.org/W4292707264

Deutsche Forschungsgemeinschaft

Grant: SPP 1738

HHS ¦ National Institutes of Health

Grant: R01 HG010501

European Commission

Grant: 664726

EMBL Interdisciplinary, International and Intersectorial Postdocs

Deutsche Forschungsgemeinschaft

Grant: 237182749/SPP 1738

Emerging roles of non-coding RNAs in nervous system development, plasticity and disease

Deutsche Forschungsgemeinschaft

Grant: unidentified

unidentified

National Institutes of Health

Grant: 1R01HG010501-01

Impact of Coding Variation on Transcription Factor - DNA Recognition

FWCI

2.82

Citation Percentile

0.9%

Citation Trend

2022

2023

2024

2025

2026

goldLicense: cc-by

journalhttps://link.springer.com/content/pdf/10.15252/msb.202110473.pdf

publisherhttps://link.springer.com/content/pdf/10.15252/msb.202110473.pdf

publisherhttps://onlinelibrary.wiley.com/doi/full-xml/10.15252/msb.202110473

publisherhttps://link.springer.com/article/10.15252/msb.202110473/fulltext.html

publisherhttps://www.embopress.org/doi/pdf/10.15252/msb.202110473

Fields of Study

Genomics and Chromatin DynamicsCRISPR and Genetic EngineeringPlant Virus Research Studies0301 basic medicine0303 health sciences03 medical and health sciences

MeSH Terms

AnimalsChromatinHumansMammalsNeuronsTranscription FactorsBrain-Derived Neurotrophic FactorMice

Keywords

BiologyCTCFChromatinEnhancerNeuroscienceTranscription factorBrain-derived neurotrophic factorRegulation of gene expressionChromatin remodelingChIA-PETCell biologyGeneticsNeurotrophic factorsGeneTranscription factorsGene ExpressionPost-mitotic NeuronsEnhancersNeuronal StimulationMammalsNeuronsMedicine (General)QH301-705.5post‐mitotic neuronsArticlesMiceR5-920AnimalsHumansEnhancers ; Gene Expression ; Neuronal Stimulation ; Post-mitotic Neurons ; Transcription FactorsBiology (General)

Sustainable Development Goals

SDG 0: Good health and well-being

Additional file 4 of Progranulin from different gliocytes in the nucleus accumbens exerts distinct roles in FTD- and neuroinflammation-induced depression-like behaviors

10.6084/m9.figshare.26558201.v1figshare

Additional file 3 of Progranulin from different gliocytes in the nucleus accumbens exerts distinct roles in FTD- and neuroinflammation-induced depression-like behaviors

10.6084/m9.figshare.26558198.v1figshare

Additional file 1 of Progranulin from different gliocytes in the nucleus accumbens exerts distinct roles in FTD- and neuroinflammation-induced depression-like behaviors

10.6084/m9.figshare.26558192figshare

Additional file 2 of Progranulin from different gliocytes in the nucleus accumbens exerts distinct roles in FTD- and neuroinflammation-induced depression-like behaviors

10.6084/m9.figshare.26558195figshare

Additional file 4 of Progranulin from different gliocytes in the nucleus accumbens exerts distinct roles in FTD- and neuroinflammation-induced depression-like behaviors

10.6084/m9.figshare.26558201figshare

Additional file 2 of Progranulin from different gliocytes in the nucleus accumbens exerts distinct roles in FTD- and neuroinflammation-induced depression-like behaviors

10.6084/m9.figshare.26558195.v1figshare

Additional file 1 of Progranulin from different gliocytes in the nucleus accumbens exerts distinct roles in FTD- and neuroinflammation-induced depression-like behaviors

10.6084/m9.figshare.26558192.v1figshare

Additional file 3 of Progranulin from different gliocytes in the nucleus accumbens exerts distinct roles in FTD- and neuroinflammation-induced depression-like behaviors

10.6084/m9.figshare.26558198figshare