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Validation and calibration of next-generation sequencing to identify Epstein-Barr virus-positive gastric cancer in The Cancer Genome Atlas

UNC Libraries(2020)10.17615/dzqp-8d78Source: DataRank Database

Validation and calibration of next-generation sequencing to identify Epstein-Barr virus-positive gastric cancer in The Cancer Genome Atlas is a research paper published in UNC Libraries (2020). On theSindex it has a DataRank of 0.

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›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

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Enrichment:Funding (16 grants)Impact (FWCI 0.00)OA: greenTopics (26)IDs (PubMed, OpenAlex)SDGs (3)

FAIR Checklist

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Findable (1/2)

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Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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Authors (10)

M. Constanza Camargo ORCID,Reanne Bowlby,Margaret L. Gulley ORCID,Andy Chu,Adam J. Bass ORCID

Live enrichment

PubMed:19910364 OpenAlex:https://openalex.org/W4301092921

National Institutes of Health

Grant: 5U24CA143858-04

UCSC-Buck Inst. Genome Data Analysis Center for TCGA Research Network (GDAC)

National Institutes of Health

Grant: 4U24CA143866-05

Cancer transcriptome characterization using massively parallel DNA sequencing

National Institutes of Health

Grant: 5U24CA143883-02

Integrative Pipeline for Analysis & Translational Application of TCGA Data (GDAC)

National Institutes of Health

Grant: 3U24CA143882-05S2

The USC-JHU Cancer Epigenome Characterization Center

National Institutes of Health

Grant: 5U24CA143799-04

TCGA Data Analysis Center at Berkeley

National Institutes of Health

Grant: 3P30CA016672-41S4

Cancer Center Support (CORE) Grant

National Institutes of Health

Grant: 3U54HG003273-04S1

Genomes and Genetics at the BCM-HGSC

National Institutes of Health

Grant: 3U54HG003067-07S1

Large Scale Sequencing and Analysis of Genomes

National Institutes of Health

Grant: 1U24CA144025-01

Harvard Genome Characterization Center

National Institutes of Health

Grant: 5U24CA143840-04

MSKCC Center for Translational Cancer Genomic Analysis

National Institutes of Health

Grant: 3U24CA143835-05S2

Center for Systems Analysis of the Cancer Regulome

National Institutes of Health

Grant: 3U54HG003079-03S1

Large Scale Genome Sequencing

National Institutes of Health

Grant: 5U24CA143843-04

The BCM Tumor Genome Characterization Center

National Institutes of Health

Grant: 3U24CA143848-02S1

Gene Expression Patterns in Human Tumors Identified Using Transcript Sequencing

National Institutes of Health

Grant: 3U24CA143845-05S1

The Cancer Genome Atlas Data Analysis Center

National Institutes of Health

Grant: 3U24CA143867-05S1

Genome Characterization Center (GCC)

FWCI

0.00

Citation Percentile

0.4%

greenLicense: Springer TDM

repositoryhttps://doi.org/10.17615/dzqp-8d78

https://doi.org/10.1007/s10120-015-0508-x

https://link.springer.com/content/pdf/10.1007/s10120-015-0508-x.pdf

https://dx.doi.org/10.17615/dzqp-8d78

https://pubmed.ncbi.nlm.nih.gov/26095338

Fields of Study

Cholangiocarcinoma and Gallbladder Cancer StudiesViral-associated cancers and disordersGastric Cancer Management and Outcomes0301 basic medicine03 medical and health sciences

Keywords

CancerDNA sequencingAtlas (anatomy)GenomeComputational biologyBiologyCancer genome sequencingGeneticsWhole genome sequencingDNAGeneAnatomyEpstein-Barr Virus InfectionsHerpesvirus 4, HumanMicroRNAsParaffin EmbeddingGenome, HumanStomach NeoplasmsCalibrationHigh-Throughput Nucleotide SequencingHumans

Sustainable Development Goals

SDG 2: 2. Zero hungerSDG 3: 3. Good healthSDG 0: Good health and well-being