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A Comparison of Six DNA Extraction Protocols for 16S, ITS and Shotgun Metagenomic Sequencing of Microbial Communities

BioTechniques(2022)10.2144/btn-2022-0032Source: DataRank Database

A Comparison of Six DNA Extraction Protocols for 16S, ITS and Shotgun Metagenomic Sequencing of Microbial Communities is a research paper published in BioTechniques (2022). On theSindex it has a DataRank of 0. It has been cited 74 times.

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Open Access74 citations

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Enrichment:Funding (15 grants)Impact (FWCI 7.30)OA: goldTopics (54)IDs (PubMed, PMC, OpenAlex)Annotations (1)SDGs (1)

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Findable (1/2)

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Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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Authors (11)

Carolina S. Carpenter ORCID,Cameron Martino ORCID,Rodolfo A. Salido ORCID,Jeremiah J. Minich ORCID,MacKenzie Bryant ORCID

Live enrichment

PubMed:35713407 PMC:PMC9361692 OpenAlex:https://openalex.org/W4283065918

Emerald Foundation

Grant: 3022

Crohn’s and Colitis Foundation of America

Grant: 675191

National Institutes of Health

Grant: 1DP1AT010885, 1RF1-AG058942-01, 5K12GM068524-17, R01DK102932, R01HL134887, R01HL140976, U01AI124316, U19AG063744

National Institute of Food and Agriculture

Grant: 2019-67013-29137

Semiconductor Research Corporation

Grant: GI18518

National Science Foundation

Grant: 2011004

Office of Naval Research

Grant: N00014-15-1-2809

NIGMS NIH HHS

Grant: K12 GM068524

NIA NIH HHS

Grant: U19 AG063744

NIA NIH HHS

Grant: RF1 AG058942

NIAID NIH HHS

Grant: U01 AI124316

NCCIH NIH HHS

Grant: DP1 AT010885

NHLBI NIH HHS

Grant: R01 HL134887

NIDDK NIH HHS

Grant: R01 DK102932

NHLBI NIH HHS

Grant: R01 HL140976

FWCI

7.30

Citation Percentile

1.0%

Citation Trend

2021

2022

2023

2024

2025

2026

goldLicense: cc-by-nc

journalhttps://doi.org/10.2144/btn-2022-0032

publisherhttps://doi.org/10.2144/btn-2022-0032

publisherhttps://www.tandfonline.com/doi/pdf/10.2144/btn-2022-0032

repositoryhttps://pubmed.ncbi.nlm.nih.gov/35713407

repositoryhttps://doaj.org/article/881547f2494a443b909be5afc751f4b2

Fields of Study

Plant Pathogens and Fungal DiseasesGut microbiota and healthGenomics and Phylogenetic StudiesBacteriaHigh-Throughput Nucleotide SequencingHumansMetagenomicsMicrobiotaPhylogenyRNA, Ribosomal, 16SSequence Analysis, DNA

MeSH Terms

BacteriaHumansPhylogenyRNA, Ribosomal, 16SSequence Analysis, DNAMetagenomicsHigh-Throughput Nucleotide SequencingMicrobiota

Keywords

MetagenomicsBiologyMicrobiomeShotgun sequencingDNA extractionShotgunAmpliconInternal transcribed spacerPyrosequencingComputational biology16S ribosomal RNAMicrobial ecologyEnvironmental DNADNA sequencingAmplicon sequencingMicrobial population biologyArchaeaHuman Microbiome ProjectRibosomal RNABacteriaPolymerase chain reactionGeneticsDNAEcologyGeneBiodiversityrRNAHigh-throughput SequencingWhole Genome SequencingMycobiomeMock CommunityEarth Microbiome Project (Emp)KatharoseqMacherey-nagelMagattract Powersoil

Sustainable Development Goals

SDG 0: Life in Land