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NMF Clustering: Accessible NMF-based Clustering Utilizing GPU Acceleration

Journal of Bioinformatics and Systems Biology(2023)10.26502/jbsb.5107072Source: DataRank Database

NMF Clustering: Accessible NMF-based Clustering Utilizing GPU Acceleration is a research paper published in Journal of Bioinformatics and Systems Biology (2023). On theSindex it has a DataRank of 0. It has been cited 6 times.

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0DataRank · unranked

Scored on demand from live citation data

Open Access6 citations

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›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (16 grants)Impact (FWCI 0.55)OA: goldTopics (22)IDs (PubMed, PMC, OpenAlex)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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Authors (8)

Edwin Huang,Alexander T. Wenzel ORCID,Kenneth Yoshimoto ORCID,Ashwyn K. Sharma ORCID,Jason K. Sicklick ORCID

Live enrichment

PubMed:38390437 PMC:PMC10883375 OpenAlex:https://openalex.org/W4390454460

NCI NIH HHS

Grant: T32 CA121938

NCI NIH HHS

Grant: U24 CA248457

NCI NIH HHS

Grant: F31 CA257344

NCI NIH HHS

Grant: U24 CA194107

NCI NIH HHS

Grant: R01 CA226803

NCI NIH HHS

Grant: R50 CA243876

National Science Foundation

Grant: 2138307

Track 3: COre National Ecosystem for CyberinfrasTructure (CONECT)

National Institutes of Health

Grant: 1R01CA226803-01A1

Targeting Drug-Resistant Cancer Stem Cell Niches of Gastrointestinal Stromal Tumor

National Institutes of Health

Grant: 5T32CA121938-14

UCSD Cancer Center Training Program in Drug Development

National Science Foundation

Grant: 2138259

Track 1: ACCESS Resource Allocations Marketplace and Platform Services (RAMPS)

National Institutes of Health

Grant: 5R50CA243876-05

Platform and portal development for accessible, reproducible cancer genomics research

National Institutes of Health

Grant: 5F31CA257344-02

Methods for improved detection of activated molecular pathways in cancer

National Institutes of Health

Grant: 1U24CA194107-01

GenePattern Notebooks for Cancer Research

National Science Foundation

Grant: 2137603

Track 4: Advanced CI Coordination Ecosystem: Monitoring and Measurement Services

National Science Foundation

Grant: 2138286

Track 2: Customized Multi-tier Assistance, Training, and Computational Help (MATCH) for End User ACCESS to CI

National Science Foundation

Grant: 2138296

ACO: An Open CI Ecosystem to Advance Scientific Discovery (OpenCI)

FWCI

0.55

Citation Percentile

0.6%

Citation Trend

2024

2025

2026

goldLicense: cc-by

journalhttps://doi.org/10.26502/jbsb.5107072

publisherhttps://doi.org/10.26502/jbsb.5107072

repositoryhttps://pubmed.ncbi.nlm.nih.gov/38390437

repositoryhttps://www.ncbi.nlm.nih.gov/pmc/articles/10883375

repositoryhttps://escholarship.org/uc/item/9rr228ts

Fields of Study

Gene expression and cancer classificationBioinformatics and Genomic NetworksSingle-cell and spatial transcriptomics0206 medical engineering02 engineering and technology

Keywords

Non-negative matrix factorizationComputer scienceCluster analysisVisualizationPython (programming language)Data miningComputationClustering high-dimensional dataInterface (matter)Matrix decompositionArtificial intelligenceParallel computingAlgorithmGeneNmfScrna-seqArticle