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Single-cell RNA sequencing reveals common and unique gene expression profiles in primary CD4+ T cells latently infected with HIV under different conditions

Frontiers in Cellular and Infection Microbiology(2023)10.3389/fcimb.2023.1286168Source: DataRank Database

Single-cell RNA sequencing reveals common and unique gene expression profiles in primary CD4+ T cells latently infected with HIV under different conditions is a research paper published in Frontiers in Cellular and Infection Microbiology (2023). On theSindex it has a DataRank of 0.241. It has been cited 4 times.

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0.241DataRank · unranked

Scored on demand from live citation data

Open Access4 citations

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›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (7 grants)Impact (FWCI 0.48)OA: goldTopics (102)IDs (PubMed, OpenAlex)SDGs (2)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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DataRank Breakdown

Base Score 100%Citation Network 0%

Base Score Contribution

0.241

From this paper's citation signal

Citation Network Contribution

Citation network not refreshed for this result

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Authors (6)

Andrew A. Qazi,Savitha Deshmukh ORCID,Roni Lobato Ventura,Amey Mukim ORCID,Nadejda Beliakova‐Bethell ORCID

Live enrichment

PubMed:38156317 OpenAlex:https://openalex.org/W4389626170

National Institutes of Health

Grant: 5P30AI036214-11

Center for AIDS Research

National Institutes of Health

Grant: 1R56AI157755-01A1

Role of viral tropism in molecular signatures of HIV latency

National Institutes of Health

Grant: 1S10OD026929-01

Illumina NovaSeq 6000 Sequencing System

BLRD VA

Grant: I01 BX005285

NIAID NIH HHS

Grant: P30 AI036214

NIAID NIH HHS

Grant: R56 AI157755

NIH HHS

Grant: S10 OD026929

FWCI

0.48

Citation Percentile

0.6%

Citation Trend

2024

2025

goldLicense: cc-by

journalhttps://doi.org/10.3389/fcimb.2023.1286168

publisherhttps://doi.org/10.3389/fcimb.2023.1286168

publisherhttps://www.frontiersin.org/articles/10.3389/fcimb.2023.1286168/full

repositoryhttps://pubmed.ncbi.nlm.nih.gov/38156317

repositoryhttps://escholarship.org/uc/item/59t668qb

Fields of Study

HIV Research and TreatmentSingle-cell and spatial transcriptomicsCytomegalovirus and herpesvirus research0301 basic medicine0303 health sciences03 medical and health sciencesHumansCD4-Positive T-LymphocytesVirus ActivationVirus LatencyHIV InfectionsTranscriptomeHIV-1ProvirusesBiomarkersSequence Analysis, RNA

MeSH Terms

HumansProvirusesVirus ActivationBiomarkersCD4-Positive T-LymphocytesHIV-1HIV InfectionsSequence Analysis, RNAVirus LatencyTranscriptome

Keywords

BiologyProvirusVirus latencyGeneGene expressionVirologyGene expression profilingCellCell typeRNAVirusGeneticsViral replicationGenomeCD4-Positive T-Lymphocytes3102 Bioinformatics and Computational Biology (for-2020)HIV Infections2.2 Factors relating to the physical environment (hrcs-rac)Cellular and Infection MicrobiologyProviruses0605 Microbiology (for)2.2 Factors relating to the physical environment2.1 Biological and endogenous factorsviral tropism32 Biomedical and Clinical Sciences (for-2020)in vitro modelsHumans (mesh)3 Good Health and Well Being (sdg)CD4-Positive T-Lymphocytes (mesh)single-cell RNA-seq3107 Microbiology (for-2020)Biological SciencesQR1-502Infection (hrcs-hc)Biomarkers (mesh)Infectious DiseasesMedical MicrobiologyHIV/AIDSRNA (mesh)biomarkerProviruses (mesh)InfectionHIV latencySequence AnalysisVirus Activation (mesh)570ImmunologyBioinformatics and Computational Biology0601 Biochemistry and Cell Biology (for)610HIV Infections (mesh)MicrobiologyHIV latency in vivoHumans3207 Medical Microbiology (for-2020)3204 Immunology (for-2020)HIV/AIDS (rcdc)31 Biological Sciences (for-2020)HIV-1 (mesh)Biomedical and Clinical SciencesGenetics (rcdc)Sequence Analysis, RNAHuman Genome2.1 Biological and endogenous factors (hrcs-rac)Transcriptome (mesh)Human Genome (rcdc)Virus Latency (mesh)Good Health and Well BeingInfectious Diseases (rcdc)HIV-1Sexually Transmitted InfectionsVirus ActivationBiochemistry and Cell BiologyTranscriptomeSexually Transmitted Infections (rcdc)Biomarkers

Sustainable Development Goals

SDG 3: 3. Good healthSDG 0: Good health and well-being