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Activation-Induced Marker Assay to Identify and Isolate HCV-Specific T Cells for Single-Cell RNA-Seq Analysis

Viruses(2024)10.3390/v16101623Source: DataRank Database

Activation-Induced Marker Assay to Identify and Isolate HCV-Specific T Cells for Single-Cell RNA-Seq Analysis is a research paper published in Viruses (2024). On theSindex it has a DataRank of 0.367. It has been cited 8 times, with 7 citing works in its 1-hop citation network.

N/A

0.367DataRank · unranked

Scored on demand from live citation data

Deposits data Open Access8 citations · 7 citing works in its network

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Linked data & code

doi

Data availability

Repositories this paper deposited data in (declared in PubMed).

GEOGSE273224

DataRank reads this dataset's downstream impact straight off the citation graph — no black box, no proprietary weighting. How is this computed?

›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (12 grants)Impact (FWCI 1.32)OA: goldTopics (56)IDs (PubMed, PMC, OpenAlex)Annotations (1)SDGs (1)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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DataRank Breakdown

Base Score 90%Citation Network 10%

Base Score Contribution

0.330

From this paper's citation signal

Citation Network Contribution

0.0376

From 4 citing papers with measurable signal

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Top 5 citers driving the network score

Ranked by each citer's contribution to N(p) — log1p(C_q) divided by its reference count — out of 7 citers.

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bioRxiv (Cold Spring Harbor Laboratory)20251 citations54 referencesContributes 0.013
Peptide-driven identification of TCRs reveals dynamics and phenotypes of CD4 T cells in tuberculosis
The Journal of Immunology20251 citations57 referencesContributes 0.012
Advances in Single‐Cell Sequencing for Infectious Diseases: Progress and Perspectives
Advanced Science20258 citations445 referencesContributes 0.005
Advanced Identification of Trypanosoma cruzi-Specific CD4+ and CD8+ T Cells in Chronic Chagas Disease Patients Using Activation-Induced Marker (AIM) Assay
Methods in molecular biology20250 citations23 referencesContributes 0.000

Authors (9)

Nicol Flores ORCID,Omar Khedr ORCID,Elsa Gomez‐Escobar ORCID,Nathalie Bédard ORCID,Nourtan F. Abdeltawab ORCID

Live enrichment

PubMed:39459954 PMC:PMC11512294 OpenAlex:https://openalex.org/W4403495853

National Institutes of Health (NIH)

Grant: R01AI136533

National Institutes of Health (NIH)

Grant: U19AI159819

National Institutes of Health (NIH)

Grant: ORIP/OD P51OD011132 (formerly NCRR P51RR000165)

National Institutes of Health (NIH)

Grant: PJT-173467

NIH HHS

Grant: P51 OD011132

NIH HHS

Grant: 1U19DK159819-21A1

NCRR NIH HHS

Grant: P51 RR000165

National Institutes of Health

Grant: 3P51OD011132-64S2

Renovation to expand and enhance NHP housing for HIV/AIDS research at the Emory NPRC

National Institutes of Health

Grant: 5R01AI136533-02

Dynamics of antigen specific B and Tfh responses during acute and chronic HCV

Canadian Institutes of Health Research

Grant: unidentified

unidentified

National Institutes of Health

Grant: 5P51RR000165-35

YERKES REGIONAL PRIMATE RESEARCH CENTER

National Institutes of Health

Grant: 1U19AI159819-01

Correlates of protective immunity to HCV and rational vaccine design

FWCI

1.32

Citation Percentile

0.8%

Citation Trend

2025

2026

goldLicense: cc-by

journalhttps://www.mdpi.com/1999-4915/16/10/1623/pdf?version=1729148093

publisherhttps://www.mdpi.com/1999-4915/16/10/1623/pdf?version=1729148093

publisherhttps://www.mdpi.com/1999-4915/16/10/1623/pdf

journalhttps://doi.org/10.3390/v16101623

repositoryhttps://pubmed.ncbi.nlm.nih.gov/39459954

Fields of Study

Single-cell and spatial transcriptomicsT-cell and B-cell ImmunologySARS-CoV-2 and COVID-19 Research03 medical and health sciences0303 health sciences

MeSH Terms

RNA-SeqSingle-Cell Gene Expression AnalysisCD69 AntigensAntigens, Differentiation, T-LymphocyteHepatitis CHumansLymphocyte ActivationT-LymphocytesBiomarkersCD4-Positive T-LymphocytesAntigens, CDHepacivirusSequence Analysis, RNACD8-Positive T-LymphocytesLectins, C-TypeReceptors, OX40Single-Cell Analysis

Keywords

RNA-SeqCellVirologyRNABiologyMolecular biologyComputational biologyGene expressionTranscriptomeGeneticsGeneHepatitis C virusAntigen-specific T CellsSingle-cell Rna SequencingAim AssayCD4-Positive T-LymphocytesAntigens, Differentiation, T-LymphocyteT-LymphocytesHepacivirusCD8-Positive T-LymphocytesLymphocyte ActivationMicrobiologyArticleAntigens, CDHumansLectins, C-TypeCD69 AntigensSequence Analysis, RNAReceptors, OX40Hepatitis CQR1-502Single-Cell Gene Expression AnalysisSingle-Cell AnalysisBiomarkers

Sustainable Development Goals

SDG 0: Good health and well-being