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Widespread premature transcription termination of Arabidopsis thaliana NLR genes by the spen protein FPA

eLife(2021)10.7554/elife.65537Source: DataRank Database

Widespread premature transcription termination of Arabidopsis thaliana NLR genes by the spen protein FPA is a research paper published in eLife (2021). On theSindex it has a DataRank of 0. It has been cited 76 times.

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Open Access76 citations

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Enrichment:Funding (14 grants)Impact (FWCI 13.73)OA: goldTopics (69)Linked Datasets (22)DataCite Reuse (22)IDs (PubMed, PMC, OpenAlex)Annotations (3)SDGs (1)

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Accessible (1/2)

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Authors (11)

Katarzyna Knop ORCID,Vasiliki Zacharaki ORCID,Anna V. Sherwood ORCID,Daniel Tomé,Xuhong Yu ORCID

Live enrichment

PubMed:33904405 PMC:PMC8116057 OpenAlex:https://openalex.org/W3157552324

Biotechnology and Biological Sciences Research Council

Grant: BB/M010066/1

The Arabidopsis Epitranscriptome

Biotechnology and Biological Sciences Research Council

Grant: BB/J00247X/1

The non-coding Arabidopsis genome

Biotechnology and Biological Sciences Research Council

Grant: BB/M004155/1

Diversifying Transcription Termination Function

H2020 Marie Skłodowska-Curie Actions

Grant: 799300

A newly discovered role for mRNA methylation in controlling plant gene expression

Wellcome Trust

Grant: 097945/B/11/Z

National Institutes of Health

Grant: GM075060

FP7-PEOPLE

Grant: 609398

AgreenSkills+

National Science Foundation

Grant: 2001115

Negative transcription elongation factors prevent transcriptional interference in plants

NIGMS NIH HHS

Grant: R01 GM075060

Wellcome Trust

Grant: 097945

Wellcome Trust Technology Platform

National Institutes of Health

Grant: 5R01GM075060-02

Molecular analysis of the autonomous pathway

Wellcome Trust

Grant: unidentified

unidentified

Wellcome Trust

FWCI

13.73

Citation Percentile

1.0%

Citation Trend

2021

2022

2023

2024

2025

2026

goldLicense: cc-by

journalhttps://doi.org/10.7554/elife.65537

publisherhttps://doi.org/10.7554/elife.65537

publisherhttps://cdn.elifesciences.org/articles/65537/elife-65537-v3.pdf

publisherhttps://cdn.elifesciences.org/articles/65537/elife-65537-v3.xml

publisherhttps://elifesciences.org/articles/65537

Fields of Study

Plant Virus Research StudiesPlant-Microbe Interactions and ImmunityRNA and protein synthesis mechanisms0301 basic medicine03 medical and health sciences0303 health sciencesArabidopsisArabidopsis ProteinsGene Expression Regulation, PlantGenes, PlantNLR ProteinsRNA, MessengerRNA-Binding ProteinsTranscription Termination, Genetic

MeSH Terms

NLR ProteinsRNA, MessengerRNA-Binding ProteinsGenes, PlantArabidopsisGene Expression Regulation, PlantArabidopsis ProteinsTranscription Termination, Genetic

Keywords

BiologyPolyadenylationGeneGeneticsGenomeArabidopsisArabidopsis thalianaPlant disease resistanceComputational biologyRNATranscription factorchromosomesPlant BiologyGene ExpressionNanoporeA. thalianaAlternative PolyadenylationNlrM6aSpenDirect Rna Sequencing570disease resistancechimeric RNAQH301-705.5ScienceNLR ProteinsGenes, Plantname=General Immunology and MicrobiologyGene Expression Regulation, Plant/dk/atira/pure/subjectarea/asjc/2800/2800name=General Biochemistry,Genetics and Molecular Biology/dk/atira/pure/subjectarea/asjc/2400/2400RNA, MessengerBiology (General)transcription termination/dk/atira/pure/subjectarea/asjc/1300/1300Arabidopsis ProteinsQR500RNA-Binding ProteinsFPAname=General NeuroscienceChromosomes and Gene ExpressionTranscription Termination, GeneticMedicine

Sustainable Development Goals

SDG 3: 3. Good health

Additional file 1 of Landscape of transcription termination in Arabidopsis revealed by single-molecule nascent RNA sequencing

10.6084/m9.figshare.17083772.v1figshare

Additional file 1 of Landscape of transcription termination in Arabidopsis revealed by single-molecule nascent RNA sequencing

10.6084/m9.figshare.17083772figshare

Additional file 5 of Landscape of transcription termination in Arabidopsis revealed by single-molecule nascent RNA sequencing

10.6084/m9.figshare.17083799.v1figshare

Additional file 5 of Landscape of transcription termination in Arabidopsis revealed by single-molecule nascent RNA sequencing

10.6084/m9.figshare.17083799figshare

Additional file 2 of A high-resolution single-molecule sequencing-based Arabidopsis transcriptome using novel methods of Iso-seq analysis

10.6084/m9.figshare.20267302.v1figshare

Additional file 2 of A high-resolution single-molecule sequencing-based Arabidopsis transcriptome using novel methods of Iso-seq analysis

10.6084/m9.figshare.20267302figshare

Additional file 3 of A high-resolution single-molecule sequencing-based Arabidopsis transcriptome using novel methods of Iso-seq analysis

10.6084/m9.figshare.20267305.v1figshare

Additional file 3 of A high-resolution single-molecule sequencing-based Arabidopsis transcriptome using novel methods of Iso-seq analysis

10.6084/m9.figshare.20267305figshare

Additional file 4 of A high-resolution single-molecule sequencing-based Arabidopsis transcriptome using novel methods of Iso-seq analysis

10.6084/m9.figshare.20267308.v1figshare

Additional file 4 of A high-resolution single-molecule sequencing-based Arabidopsis transcriptome using novel methods of Iso-seq analysis

10.6084/m9.figshare.20267308figshare

Additional file 1 of Coupling of co-transcriptional splicing and 3’ end Pol II pausing during termination in Arabidopsis

10.6084/m9.figshare.24123741.v1figshare

Additional file 1 of Coupling of co-transcriptional splicing and 3’ end Pol II pausing during termination in Arabidopsis

10.6084/m9.figshare.24123741figshare

Additional file 3 of Coupling of co-transcriptional splicing and 3’ end Pol II pausing during termination in Arabidopsis

10.6084/m9.figshare.24123750.v1figshare

Additional file 3 of Coupling of co-transcriptional splicing and 3’ end Pol II pausing during termination in Arabidopsis

10.6084/m9.figshare.24123750figshare

Additional file 4 of Landscape of transcription termination in Arabidopsis revealed by single-molecule nascent RNA sequencing

10.6084/m9.figshare.17083790.v1figshare

Additional file 3 of Landscape of transcription termination in Arabidopsis revealed by single-molecule nascent RNA sequencing

10.6084/m9.figshare.17083781figshare

Additional file 4 of Landscape of transcription termination in Arabidopsis revealed by single-molecule nascent RNA sequencing

10.6084/m9.figshare.17083790figshare

Additional file 3 of Landscape of transcription termination in Arabidopsis revealed by single-molecule nascent RNA sequencing

10.6084/m9.figshare.17083781.v1figshare

Additional file 2 of Landscape of transcription termination in Arabidopsis revealed by single-molecule nascent RNA sequencing

10.6084/m9.figshare.17083775.v1figshare

Additional file 2 of Landscape of transcription termination in Arabidopsis revealed by single-molecule nascent RNA sequencing

10.6084/m9.figshare.17083775figshare

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Widespread premature transcription termination of Arabidopsis thaliana NLR genes by the spen protein FPA

FAIR Checklist

Authors (11)

Funding (14 grants)

Impact

Open Access

Topics

Linked Datasets (22)

Annotations (Europe PMC)

Related Papers (10)