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Combining genotypes and T cell receptor distributions to infer genetic loci determining V(D)J recombination probabilities

eLife(2022)10.7554/elife.73475Source: DataRank Database

Combining genotypes and T cell receptor distributions to infer genetic loci determining V(D)J recombination probabilities is a research paper published in eLife (2022). On theSindex it has a DataRank of 1.0. It has been cited 26 times, with 26 citing works in its 1-hop citation network.

N/A

1.0DataRank · unranked

Scored on demand from live citation data

Deposits data Open Access26 citations · 26 citing works in its network

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Linked data & code

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Data availability

Repositories this paper deposited data in (declared in PubMed).

dbGaPphs001918.v1.p1

DataRank reads this dataset's downstream impact straight off the citation graph — no black box, no proprietary weighting. How is this computed?

›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (33 grants)Impact (FWCI 1.81)OA: goldTopics (47)IDs (PubMed, PMC, OpenAlex)Annotations (2)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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DataRank Breakdown

Base Score 48%Citation Network 52%

Base Score Contribution

0.494

From this paper's citation signal

Citation Network Contribution

0.541

From 20 citing papers with measurable signal

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Top 5 citers driving the network score

Ranked by each citer's contribution to N(p) — log1p(C_q) divided by its reference count — out of 26 citers.

Targeted long-read sequencing facilitates phased diploid assembly and genotyping of the human T cell receptor alpha, delta, and beta loci
Cell Genomics202226 citations50 referencesContributes 0.066
Learning predictive signatures of HLA type from T-cell repertoires
bioRxiv (Cold Spring Harbor Laboratory)20249 citations42 referencesContributes 0.055
Robust and prototypical immune responses toward COVID-19 vaccine in First Nations peoples are impacted by comorbidities
Nature Immunology202333 citations65 referencesContributes 0.054
IGHV allele similarity clustering improves genotype inference from adaptive immune receptor repertoire sequencing data
Nucleic Acids Research202319 citations56 referencesContributes 0.053
Targeted long-read sequencing facilitates phased diploid assembly and genotyping of the human T cell receptor alpha, delta and beta loci
bioRxiv (Cold Spring Harbor Laboratory)202210 citations45 referencesContributes 0.053

Authors (12)

Aisha Souquette ORCID,David M Levine,Stefan A Schattgen,E Kaitlynn Allen,Guillermina Kuan ORCID

Live enrichment

PubMed:35315770 PMC:PMC8940181 OpenAlex:https://openalex.org/W4225810652

National Institutes of Health

Grant: R01 AI146028

National Institutes of Health

Grant: R01 AI136514

National Institutes of Health

Grant: R01 AI120997

National Institutes of Health

Grant: R01 AI107625

National Institute of Allergy and Infectious Diseases

Grant: HHSN272201 400006C

National Institute of Allergy and Infectious Diseases

Grant: 75N93021C00016

National Institute of Allergy and Infectious Diseases

Grant: AI33484

National Institute of Allergy and Infectious Diseases

Grant: AI149213

National Cancer Institute

Grant: CA015704