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ATP binding facilitates target search of SWR1 chromatin remodeler by promoting one-dimensional diffusion on DNA

eLife(2022)10.7554/elife.77352Source: DataRank Database

ATP binding facilitates target search of SWR1 chromatin remodeler by promoting one-dimensional diffusion on DNA is a research paper published in eLife (2022). On theSindex it has a DataRank of 0.859. It has been cited 33 times, with 22 citing works in its 1-hop citation network.

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0.859DataRank · unranked

Scored on demand from live citation data

Deposits data Open Access33 citations · 22 citing works in its network

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Data availability

Repositories this paper deposited data in (declared in PubMed).

Dryad10.5061/dryad.ghx3ffbqw

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›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (16 grants)OA: goldTopics (38)IDs (PubMed, PMC)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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DataRank Breakdown

Base Score 62%Citation Network 38%

Base Score Contribution

0.529

From this paper's citation signal

Citation Network Contribution

0.330

From 14 citing papers with measurable signal

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Top 5 citers driving the network score

Ranked by each citer's contribution to N(p) — log1p(C_q) divided by its reference count — out of 22 citers.

Nucleosome flipping drives kinetic proofreading and processivity by SWR1
Nature202412 citations50 referencesContributes 0.051
Visualization of direct and diffusion-assisted RAD51 nucleation by full-length human BRCA2 protein
Molecular Cell202330 citations77 referencesContributes 0.045
The impact of the sequence-dependent physical properties of DNA on chromatin dynamics
Current Opinion in Structural Biology202313 citations64 referencesContributes 0.041
Structural insights into histone exchange by human SRCAP complex
Cell Discovery202435 citations91 referencesContributes 0.039
Mechanistic insights into INO80-type chromatin remodelers
Current Opinion in Structural Biology20255 citations46 referencesContributes 0.039

Authors (10)

Matthew F. Poyton ORCID,Anand Ranjan ORCID,Giho Park ORCID,Robert K. Louder ORCID,Xinyu A. Feng ORCID

Live enrichment

PubMed:35876491 PMC:PMC9365391

National Institutes of Health

Grant: S10 OD025221

National Institutes of Health

Grant: R35 GM122569

National Institutes of Health

Grant: R01 GM125831

National Science Foundation

Grant: DGE-1746891

National Institutes of Health

Grant: T32 GM007445

National Institutes of Health

Grant: F32 GM128299

National Institutes of Health

Grant: F32 GM133151

NIGMS NIH HHS

Grant: R01 GM132290

National Institutes of Health

Grant: 1S10OD025221-01A1

Lumicks C-Trap for a Core Facility

National Institutes of Health

Grant: 1F32GM128299-01

Characterizing SWR1-mediated Histone Exchange at the Single Molecule Level

National Institutes of Health

Grant: 5F32GM133151-03

High resolution chromatin structure of purified eukaryotic genes

National Institutes of Health

Grant: 5T32GM007445-33

Biochemistry, Cellular and Molecular Biology Program

National Institutes of Health

Grant: 5R35GM122569-09

Single molecule and biophysical studies of nucleic acid remodeling

National Institutes of Health

Grant: 3R01GM125831-02S1

Mechanism of histone H2A.Z exchange catalyzed by SWR1 chromatin remodeler

National Science Foundation

Grant: 1746891

Graduate Research Fellowship Program (GRFP)

Howard Hughes Medical Institute

goldLicense: cc-by

publisherhttps://doi.org/10.7554/elife.77352

publisherhttps://cdn.elifesciences.org/articles/77352/elife-77352-v2.pdf

publisherhttps://cdn.elifesciences.org/articles/77352/elife-77352-v2.xml

publisherhttps://elifesciences.org/articles/77352

repositoryhttps://doaj.org/article/6aa0b8a428a042de8a34d93545e86580

Fields of Study

0301 basic medicine03 medical and health sciences

MeSH Terms

ChromatinNucleosomesSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsHistonesDNAAdenosine TriphosphateChromatin Assembly and DisassemblyAdenosine Triphosphatases

Keywords

S. cerevisiaeOptical tweezersSingle moleculechromosomesGene ExpressionStructural BiologyTarget SearchSwr1Chromatin RemodelerMolecular BiophysicsOne-dimensional DiffusionAdenosine TriphosphatasesSaccharomyces cerevisiae ProteinsQH301-705.5ScienceQRDNASaccharomyces cerevisiaeChromosomes and Gene ExpressionChromatin Assembly and DisassemblyChromatinNucleosomesHistonesAdenosine TriphosphateMedicineBiology (General)

Related Papers (1)

Live-cell single particle imaging reveals the role of RNA polymerase II in histone H2A.Z eviction

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2.2DataRank · unranked

eLife(2020)

co-citedsame journal

10.7554/elife.55667