Jennifer G. Abelin

Also affiliated with Dana-Farber Cancer Institute

Immunology and MicrobiologyBiochemistry, Genetics and Molecular BiologyMedicineChemistry

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 18 papers. Top paper: “What Can Ribo-Seq, Immunopeptidomics, and Proteomics Tell Us About the Noncanonical Proteome?”.

What Can Ribo-Seq, Immunopeptidomics, and Proteomics Tell Us About the Noncanonical Proteome?

Molecular & Cellular Proteomics(2023)10.1016/j.mcpro.2023.100631

N/A

1.8DataRank · unranked

92 citations

Jennifer G. Abelin, Leron W. Kok, Karl R. Clauser, Jonathan M. Mudge, Jorge Ruiz-Orera +5 more

Pan-cancer proteogenomics characterization of tumor immunity

Cell(2024)10.1016/j.cell.2024.01.027

N/A

1.7DataRank · unranked

91 citations

Weiping Ma, Tomer M. Yaron, Francesca Pia Caruso, Nicole Tignor, Joshua M. Wang +95 more

Profiling SARS-CoV-2 HLA-I peptidome reveals T cell epitopes from out-of-frame ORFs

Cell(2021)10.1016/j.cell.2021.05.046

N/A

0.768DataRank · unranked

166 citations

Susan Klaeger, Siranush Sarkizova, Leah R. Pearlman, Da‐Yuan Chen, Kathleen Gallagher +53 more

Optimized Liquid and Gas Phase Fractionation Increases HLA-Peptidome Coverage for Primary Cell and Tissue Samples

Molecular & Cellular Proteomics(2021)10.1016/j.mcpro.2021.100133

N/A

0.609DataRank · unranked

57 citations

Annie Apffel, Karl R. Clauser, Siranush Sarkizova, Giacomo Oliveira, Suzanna Rachimi +12 more

HLA-II immunopeptidome profiling and deep learning reveal features of antigenicity to inform antigen discovery

Immunity(2023)10.1016/j.immuni.2023.05.009

N/A

0.596DataRank · unranked

52 citations

Jihye Park, Jennifer G. Abelin, Hannah Taylor, Thomas K. Pedersen, Damian R. Plichta +9 more

High-quality peptide evidence for annotating non-canonical open reading frames as human proteins

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.09.09.612016

N/A

0.542DataRank · unranked

36 citations

Leron W. Kok, Jonathan M. Mudge, Jorge Ruiz-Orera, Ivo Fierro-Monti, Zhi Sun +38 more

Pan-viral ORFs discovery using Massively Parallel Ribosome Profiling

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.09.26.559641

N/A

0.291DataRank · unranked

4 citations

Matthew R. Bauer, Alexandra C. Stanton, Susan Klaeger, Eva K. Verzani, Daniel López +6 more

Optimized liquid and gas phase fractionation increase HLA-peptidome coverage for primary cell and tissue samples

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.05.25.445487

N/A

0.104DataRank · unranked

1 citations

Annie Apffel, Karl R. Clauser, Siranush Sarkizova, Giacomo Oliveira, Suzanna Rachimi +12 more

Identification of Post-translationally Modified MHC Class I–Associated Peptides as Potential Cancer Immunotherapeutic Targets

Molecular & Cellular Proteomics(2025)10.1016/j.mcpro.2025.100971

N/A

0DataRank · unranked

7 citations

Larry Reser, Maria Virginia Ruiz Cuevas, Jennifer G. Abelin, Jeffrey Shabanowitz, Donald F. Hunt +2 more

SARS-CoV-2 infected cells present HLA-I peptides from canonical and out-of-frame ORFs

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.10.02.324145

N/A

0DataRank · unranked

21 citations

Susan Klaeger, Siranush Sarkizova, Leah R. Pearlman, Da‐Yuan Chen, Matthew R. Bauer +16 more

HIF regulates multiple translated endogenous retroviruses: Implications for cancer immunotherapy

Cell(2025)10.1016/j.cell.2025.01.046

N/A

0DataRank · unranked

56 citations

David A. Braun, Karl R. Clauser, Vijyendra Ramesh, Nitin H. Shirole, Joseph E. Duke-Cohan +41 more

MS-Based HLA-II Peptidomics Combined With Multiomics Will Aid the Development of Future Immunotherapies

Molecular & Cellular Proteomics(2021)10.1016/j.mcpro.2021.100116

N/A

0DataRank · unranked

23 citations

Susan Klaeger, Karl R. Clauser, Siranush Sarkizova, Shira Weingarten-Gabbay, Daniel B. Graham +3 more

Tumor Infiltrating Lymphocytes Target HLA-I Phosphopeptides Derived From Cancer Signaling in Colorectal Cancer

Frontiers in Immunology(2021)10.3389/fimmu.2021.723566

N/A

0DataRank · unranked

22 citations

Jennifer G. Abelin, Stacy A. Malaker, Paisley T. Myers, Abu Z. Saeed, Lora Steadman +6 more

Sensitive, High-Throughput HLA-I and HLA-II Immunopeptidomics Using Parallel Accumulation-Serial Fragmentation Mass Spectrometry

Molecular & Cellular Proteomics(2023)10.1016/j.mcpro.2023.100563

N/A

0DataRank · unranked

50 citations

Claudia Ctortecka, Alvaro Sebastian Vaca Jácome, Susan Klaeger, Eva K. Verzani, Gabrielle M. Hernandez +5 more

The HLA-II immunopeptidome of SARS-CoV-2

Cell Reports(2023)10.1016/j.celrep.2023.113596

N/A

0DataRank · unranked

15 citations

Da‐Yuan Chen, Siranush Sarkizova, Hannah B. Taylor, Matteo Gentili, Gabrielle M. Hernandez +10 more

What can Ribo-seq and proteomics tell us about the non-canonical proteome?

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.16.541049

N/A

0DataRank · unranked

9 citations

Jennifer G. Abelin, Leron W. Kok, Karl R. Clauser, Jonathan M. Mudge, Jorge Ruiz-Orera +4 more

Sensitive, high-throughput HLA-I and HLA-II immunopeptidomics using parallel accumulation-serial fragmentation mass spectrometry

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.10.532106

N/A

0DataRank · unranked

6 citations

Claudia Ctortecka, Alvaro Sebastian Vaca Jácome, Susan Klaeger, Eva K. Verzani, Gabrielle M. Hernandez +5 more

The HLA-II immunopeptidome of SARS-CoV-2

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.26.542482

N/A

0DataRank · unranked

5 citations

Da‐Yuan Chen, Siranush Sarkizova, Hannah B. Taylor, Matteo Gentili, Leah R. Pearlman +9 more