John R. Yates

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 112 papers. Top paper: “Improved Identification and Analysis of Small Open Reading Frame Encoded Polypeptides”.

Improved Identification and Analysis of Small Open Reading Frame Encoded Polypeptides

Analytical Chemistry(2016)10.1021/acs.analchem.6b00191

N/A

5.2DataRank · unranked

150 citations

Jolene K. Diedrich, Irwin Jungreis, Cynthia Donaldson, Joan Vaughan, Sharon L. R. Kardia +4 more

An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database

Journal of the American Society for Mass Spectrometry(1994)10.1016/1044-0305(94)80016-2

N/A

1.3DataRank · unranked

6604 citations

Ashley L. McCormack, John R. Yates, Jimmy K. Eng

Quantitative transportomics identifies Kif5a as a major regulator of neurodegeneration

eLife(2022)10.7554/elife.68148

N/A

1.2DataRank · unranked

35 citations

Lucio M Schiapparelli, Yuanhui Ma, Satoshi Yokota, Melissa Atkins, Xin Xia +10 more

The RNA phosphatase PIR-1 regulates endogenous small RNA pathways in C. elegans

Molecular Cell(2020)10.1016/j.molcel.2020.12.004

N/A

1.0DataRank · unranked

29 citations

Hui Dai, Lichao Li, James J. Moresco, Myung Eun Oh, Darryl Conte +4 more

SNPC-1.3 is a sex-specific transcription factor that drives male piRNA expression in C. elegans

eLife(2021)10.7554/elife.60681

N/A

0.764DataRank · unranked

19 citations

Rebecca J. Tay, Margaret R. Starostik, Suhua Feng, James J. Moresco, Brooke E. E. Montgomery +8 more

Visualization of the HIV-1 Env glycan shield across scales

Proceedings of the National Academy of Sciences(2020)10.1073/pnas.2000260117

N/A

0.694DataRank · unranked

101 citations

Srirupa Chakraborty, Xiaoning Wang, Christopher A. Cottrell, Jonathan L. Torres, Jolene K. Diedrich +7 more

Phosphorylation of pyruvate dehydrogenase inversely associates with neuronal activity

Neuron(2024)10.1016/j.neuron.2023.12.015

N/A

0.609DataRank · unranked

57 citations

Yu Wang, Tianbo Qi, Xi Zhang, Leyao Shen, Jingrui Ma +16 more

π-HuB: the proteomic navigator of the human body

Nature(2024)10.1038/s41586-024-08280-5

N/A

0.581DataRank · unranked

47 citations

Ruedi Aebersold, Mark S. Baker, Xiu‐Wu Bian, Xiaochen Bo, Daniel W. Chan +95 more

Borrelia burgdorferi infection modifies protein content in saliva of Ixodes scapularis nymphs

BMC Genomics(2021)10.1186/s12864-021-07429-0

N/A

0.578DataRank · unranked

46 citations

Lucas Tirloni, Emily Bencosme-Cuevas, Tae Heung Kim, Jolene K. Diedrich, John R. Yates +2 more

Shared and Distinctive Neighborhoods of Emerin and Lamin B Receptor Revealed by Proximity Labeling and Quantitative Proteomics

Journal of Proteome Research(2022)10.1021/acs.jproteome.2c00281

N/A

0.570DataRank · unranked

15 citations

Xi Zhang, Kanishk Abhinav, Julie A Nguyen, Sabyasachi Baboo, Salvador Martínez‐Bartolomé +6 more

Identification and characterization of proteins that form the inner core Ixodes scapularis tick attachment cement layer

Scientific Reports(2022)10.1038/s41598-022-24881-4

N/A

0.515DataRank · unranked

30 citations

Željko Radulović, Lindsay Porter, Taylor Hollman Britten, Tae Kwon Kim, Lucas Tirloni +6 more

Vaccination with an mRNA-encoded membrane-bound HIV envelope trimer induces neutralizing antibodies in animal models

Science Translational Medicine(2025)10.1126/scitranslmed.adw0721

N/A

0.510DataRank · unranked

29 citations

Christopher A. Cottrell, Ester Marina-Zárate, Alessia Liguori, Elise Landais, Jonathan L. Torres +40 more

Expression of Amyloidogenic Transthyretin Drives Hepatic Proteostasis Remodeling in an Induced Pluripotent Stem Cell Model of Systemic Amyloid Disease

Stem Cell Reports(2020)10.1016/j.stemcr.2020.07.003

N/A

0.494DataRank · unranked

26 citations

Derek C. Liberti, Taylor Matte, Jessica D. Rosarda, Celia Torres-Arancivia, Sabrina Ghosh +11 more

The INO80 Complex Regulates Epigenetic Inheritance of Heterochromatin

Cell Reports(2020)10.1016/j.celrep.2020.108561

N/A

0.483DataRank · unranked

24 citations

Kehan Bao, Jolene K. Diedrich, Xiao Chen, Chao Lü, John R. Yates +2 more

PTPN22 phosphorylation acts as a molecular rheostat for the inhibition of TCR signaling

Science Signaling(2020)10.1126/scisignal.aaw8130

N/A

0.470DataRank · unranked

22 citations

Mattias N. D. Svensson, Nathaniel H. O. Harder, Wan‐Chen Hsieh, Eugenio Santelli, William B. Kiosses +7 more

Wiskott-Aldrich syndrome protein forms nuclear condensates and regulates alternative splicing

Nature Communications(2022)10.1038/s41467-022-31220-8

N/A

0.464DataRank · unranked

21 citations

Xuan Zhou, Keiichiro Suzuki, Gerardo Ramos‐Mandujano, Mengge Wang, Muhammad Tehseen +31 more

Proteomic screen reveals diverse protein transport between connected neurons in the visual system

Cell Reports(2022)10.1016/j.celrep.2021.110287

N/A

0.457DataRank · unranked

20 citations

Pranav Sharma, Hai‐yan He, Jianli Li, Sahil Shah, Daniel B. McClatchy +6 more

Changes in saliva protein profile throughout Rhipicephalus microplus blood feeding

Parasites & Vectors(2024)10.1186/s13071-024-06136-5

N/A

0.442DataRank · unranked

18 citations

Stephen Lu, Antônio F. M. Pinto, Jolene K. Diedrich, John R. Yates, Albert Mulenga +4 more

Aurora Kinase A proximity map reveals centriolar satellites as regulators of its ciliary function

EMBO Reports(2021)10.15252/embr.202051902

N/A

0.442DataRank · unranked

18 citations

Navin Rauniyar, John R. Yates, Elif Nur Firat‐Karalar, Melis D. Arslanhan

Metarhizium anisopliae E6 secretome reveals molecular players in host specificity and toxicity linked to cattle tick infection

Fungal Biology(2023)10.1016/j.funbio.2023.06.006

N/A

0.363DataRank · unranked

7 citations

Leonardo Broetto, Camila Innocente-Alves, Rafael Lopes da Rosa, Yohana Porto Calegari-Alves, Rodrigo Campos-Silva +9 more

SMG1 and CDK12 Link ΔNp63α Phosphorylation to RNA Surveillance in Keratinocytes

Journal of Proteome Research(2021)10.1021/acs.jproteome.1c00427

N/A

0.360DataRank · unranked

10 citations

Sandra Pankow, John R. Yates, Casimir Bamberger

Identification of sulfenylation patterns in trophozoite stage Plasmodium falciparum using a non-dimedone based probe

Molecular and Biochemical Parasitology(2021)10.1016/j.molbiopara.2021.111362

N/A

0.345DataRank · unranked

9 citations

Hanzhi Wu, Cristina M. Furdui, Leslie B. Poole, Claire Delahunty, Sung Kyu Robin Park +4 more

Repeat modules and N-linked glycans define structure and antigenicity of a critical enterotoxigenic E. coli adhesin

PLoS Pathogens(2024)10.1371/journal.ppat.1012241

N/A

0.330DataRank · unranked

8 citations

Marjahan Akhtar, Mahima Thapa, Tim J. Vickers, Aaron J. Schmitz, Jonathan L. Torres +18 more

Covalent Protein Painting Reveals Structural Changes in the Proteome in Alzheimer Disease

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.01.31.929117

N/A

0.312DataRank · unranked

7 citations

Sandra Pankow, Salvador Martínez‐Bartolomé, Michelle Ma, Jolene K. Diedrich, Robert A. Rissman +2 more

Heat shock chaperone HSPB1 regulates cytoplasmic TDP-43 phase separation and liquid-to-gel transition

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.14.464447

N/A

0.292DataRank · unranked

6 citations

Jiaojiao Hu, Bankhole Aladesuyi, Alexander Goginashvili, Sonia Vazquez‐Sanchez, Jolene K. Diedrich +9 more

Activity-dependent synthesis of Emerin gates neuronal plasticity by regulating proteostasis

Cell Reports(2025)10.1016/j.celrep.2025.115439

N/A

0.269DataRank · unranked

5 citations

Ruoxi Wang, Daniel B. McClatchy, Yuanhui Ma, Jolene K. Diedrich, Manuel Sanchez-Alavez +4 more

Mechanistic Determinants of Slow Axonal Transport and Presynaptic Targeting of Clathrin Packets

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.02.20.958140

N/A

0.269DataRank · unranked

5 citations

Florian Wernert, Sébastien Phan, Daniela Boassa, Utpal Das, Rohan Sharma +7 more

Glycoengineering of NK Cells with Glycan Ligands of CD22 and Selectins for B‐Cell Lymphoma Therapy

Angewandte Chemie(2020)10.1002/ange.202005934

N/A

0.208DataRank · unranked

3 citations

Chenhua Yu, Peng Wang, Yujie Shi, Weiqian Cao, Bo Cheng +13 more

Native top-down proteomics reveals EGFR–ERα signaling crosstalk in breast cancer cells dissociates NUTF2 dimers to modulate ERα signaling and cell growth

Research Square(2023)10.21203/rs.3.rs-3097806/v1

N/A

0.208DataRank · unranked

3 citations

Fábio Pereira Gomes, Kenneth R. Durbin, Kevin L. Schauer, J.C. Nwachukwu, Robin Russo +10 more

In vivo conformational space and defects of misfolded CFTR variants by covalent protein painting

Nature Communications(2025)10.1038/s41467-025-63354-w

N/A

0.104DataRank · unranked

1 citations

Casimir Bamberger, Salvador Martínez‐Bartolomé, Robin Park, John R. Yates, Sandra Pankow

GMP Manufacturing and Characterization of the HIV Booster Immunogen HxB2.WT.Core-C4b for Germline Targeting Vaccine Strategies

Vaccines(2025)10.3390/vaccines13090980

N/A

0.104DataRank · unranked

1 citations

Latha Kallur Siddaramaiah, Philipp Mundsperger, Dietmar Katinger, Katharina Fauland, Günter Kreismayr +16 more

Nvp63 and nvPIWIL1 Suppress Retrotransposon Activation in the Sea Anemone Nematostella vectensis

Journal of Proteome Research(2022)10.1021/acs.jproteome.2c00296

N/A

0.104DataRank · unranked

1 citations

Sandra Pankow, John R. Yates, Casimir Bamberger

In vivo Protein Footprinting Reveals the Dynamic Conformational Changes of Proteome of Multiple Tissues in Progressing Alzheimer’s Disease

Claves de razón práctica(2023)10.1101/2023.05.29.542496

N/A

0.104DataRank · unranked

1 citations

H. S. Kim, Jolene K. Diedrich, Casimir Bamberger, Daniel B. McClatchy, John R. Yates +1 more

Arg-tRNA synthetase links inflammatory metabolism to RNA splicing and nuclear trafficking via SRRM2

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.09.07.459304

N/A

0DataRank · unranked

3 citations

Jolene K. Diedrich, Douglas C. Wu, Justin J. Lim, Ryan M. Nottingham, James J. Moresco +5 more

Identification of in vivo CFTR conformations during biogenesis and upon misfolding by covalent protein painting (CPP)

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.02.433670

N/A

0DataRank · unranked

2 citations

Casimir Bamberger, Salvador Martínez‐Bartolomé, Sung Kyu Park, John R. Yates, Sandra Pankow

DeGlyPHER: an ultrasensitive method for analysis of viral spike N-glycoforms

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.05.13.444041

N/A

0DataRank · unranked

2 citations

Jolene K. Diedrich, Salvador Martínez‐Bartolomé, Xiaoning Wang, Torben Schiffner, Bettina Gröschel +4 more

Unconventional tonicity-regulated nuclear trafficking of NFAT5 mediated by KPNB1, XPOT and RUVBL2

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.07.11.451941

N/A

0DataRank · unranked

1 citations

Tingting Huang, Ning Chow, Shuqi Zhang, Yanxiang Zhao, Catherine C. L. Wong +11 more

Rvb1/Rvb2 proteins couple transcription and translation during glucose starvation

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.17.464753

N/A

0DataRank · unranked

0 citations

Sharon Tracy, Vince Harjono, Fan Xu, James J. Moresco, John R. Yates +2 more

Intercepting IRE1 kinase‐FMRP signaling prevents atherosclerosis progression

EMBO Molecular Medicine(2022)10.15252/emmm.202115344

N/A

0DataRank · unranked

36 citations

Sabyasachi Baboo, Syed Muhammad Hamid, Asli E. Atici, Özlem Tufanlı, Sabrina Robichaud +13 more

Targeted protein S-nitrosylation of ACE2 inhibits SARS-CoV-2 infection

Nature Chemical Biology(2022)10.1038/s41589-022-01149-6

N/A

0DataRank · unranked

35 citations

Tomohiro Nakamura, Nathan Beutler, Xu Zhang, Juan Piña-Crespo, Maria Talantova +24 more

Quantitative BONCAT Allows Identification of Newly Synthesized Proteins after Optic Nerve Injury

Journal of Neuroscience(2022)10.1523/jneurosci.3100-20.2022

N/A

0DataRank · unranked

15 citations

Lucio Schiapparelli, Satoshi Yokota, Yuanhui Ma, Xin Xia, Sahana Shankar +7 more

DeGlyPHER: Highly sensitive site-specific analysis of N-linked glycans on proteins

Methods in enzymology on CD-ROM/Methods in enzymology(2022)10.1016/bs.mie.2022.09.004

N/A

0DataRank · unranked

9 citations

Jolene K. Diedrich, Salvador Martínez‐Bartolomé, Xiaoning Wang, Torben Schiffner, Bettina Gröschel +4 more

Unconventional tonicity-regulated nuclear trafficking of NFAT5 mediated by KPNB1, XPOT and RUVBL2

Journal of Cell Science(2022)10.1242/jcs.259280

N/A

0DataRank · unranked

6 citations

Tingting Huang, Ning Chow, Shuqi Zhang, Yanxiang Zhao, Mary P. Chau +13 more

Identification and characterization of proteins that form the inner core Ixodes scapularis tick attachment cement layer

Research Square(2022)10.21203/rs.3.rs-1839910/v1

N/A

0DataRank · unranked

0 citations

Željko Radulović, Lindsay Porter, Taylor Hollman Britten, Tae Kwon Kim, Lucas Tirloni +6 more

Arg-tRNA synthetase links inflammatory metabolism to RNA splicing and nuclear trafficking via SRRM2

Nature Cell Biology(2023)10.1038/s41556-023-01118-8

N/A

0DataRank · unranked

38 citations

Jolene K. Diedrich, Douglas C. Wu, Justin J. Lim, Ryan M. Nottingham, James J. Moresco +5 more

Mocetinostat activates Krüppel-like factor 4 and protects against tissue destruction and inflammation in osteoarthritis

JCI Insight(2023)10.1172/jci.insight.170513

N/A

0DataRank · unranked

25 citations

Daniel B. McClatchy, Jolene K. Diedrich, Merissa Olmer, Kristen Johnson, John R. Yates +2 more

Trans-Golgi protein TVP23B regulates host-microbe interactions via Paneth cell homeostasis and Goblet cell glycosylation

Nature Communications(2023)10.1038/s41467-023-39398-1

N/A

0DataRank · unranked

13 citations

William McAlpine, Aaron M. Fond, Evan Nair‐Gill, Jin Huk Choi, Elisabeth Nyström +13 more

Essential role of MFSD1-GLMP-GIMAP5 in lymphocyte survival and liver homeostasis

Proceedings of the National Academy of Sciences(2023)10.1073/pnas.2314429120

N/A

0DataRank · unranked

11 citations

James J. Moresco, Jolene K. Diedrich, Antônio F. M. Pinto, Jeffrey A. SoRelle, Jianhui Wang +8 more

Quantitative structural proteomics in living cells by covalent protein painting

Methods in enzymology on CD-ROM/Methods in enzymology(2023)10.1016/bs.mie.2022.08.046

N/A

0DataRank · unranked

10 citations

Sandra Pankow, Tom Casimir Bamberger, John R. Yates, Ahrum Son

Comparative membrane proteomics reveals diverse cell regulators concentrated at the nuclear envelope

Life Science Alliance(2023)10.26508/lsa.202301998

N/A

0DataRank · unranked

10 citations

Xi Zhang, Sabyasachi Baboo, Julie A Nguyen, Salvador Martínez‐Bartolomé, Esther Loose +4 more

Nuclear translocation of an aminoacyl-tRNA synthetase may mediate a chronic “integrated stress response”

Cell Reports(2023)10.1016/j.celrep.2023.112632

N/A

0DataRank · unranked

9 citations

Na Wei, Haissi Cui, Yi Shi, Guangsen Fu, Navin Rauniyar +9 more

Intrinsic mesoscale properties of a Polycomb protein underpin heterochromatin fidelity

Nature Structural & Molecular Biology(2023)10.1038/s41594-023-01000-z

N/A

0DataRank · unranked

13 citations

Stephen Abini-Agbomson, Daniela S. Perry, Allen Goodman, Beiduo Rao, Manning Y. Huang +6 more

Montane Rattlesnakes in México: Venoms of Crotalus tancitarensis and Related Species within the Crotalus intermedius Group

Toxins(2023)10.3390/toxins15010072

N/A

0DataRank · unranked

6 citations

Anthony J. Saviola, Javier Alvarado‐Díaz, Adrían Quijada Mascareñas, Kirk C. Hansen, John R. Yates +2 more

Insulin secretion deficits in a Prader-Willi syndrome β-cell model are associated with a concerted downregulation of multiple endoplasmic reticulum chaperones

PLoS Genetics(2023)10.1371/journal.pgen.1010710

N/A

0DataRank · unranked

3 citations

Marie A. Johnson, James J. Moresco, Patrizia Luppi, Dale W. Lewis, Donna B. Stolz +9 more

Evolving spike-protein N -glycosylation in SARS-CoV-2 variants

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.08.539897

N/A

0DataRank · unranked

12 citations

Jolene K. Diedrich, Jonathan L. Torres, Jeffrey Copps, Bhavya Singh, Patrick T. Garrett +4 more

Comparative membrane proteomics reveals diverse cell regulators concentrated at the nuclear envelope

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.02.13.528342

N/A

0DataRank · unranked

5 citations

Xi Zhang, Sabyasachi Baboo, Julie A Nguyen, Salvador Martínez‐Bartolomé, Esther Loose +4 more

Do perineuronal nets stabilize the engram of a synaptic circuit?

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.04.09.536164

N/A

0DataRank · unranked

4 citations

Sakina P. Lemieux, Thomas J. Deerinck, Eric A. Bushong, Brandon H. Toyama, Álex Pérez +9 more

Phosphorylation of pyruvate dehydrogenase marks the inhibition of in vivo neuronal activity

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.13.532494

N/A

0DataRank · unranked

2 citations

Yu Wang, Tianbo Qi, Xi Zhang, Leyao Shen, Jingrui Ma +12 more

Publisher Correction: Arg-tRNA synthetase links inflammatory metabolism to RNA splicing and nuclear trafficking via SRRM2

Nature Cell Biology(2023)10.1038/s41556-023-01172-2

N/A

0DataRank · unranked

0 citations

Jolene K. Diedrich, Douglas C. Wu, Justin J. Lim, Ryan M. Nottingham, James J. Moresco +5 more

Using In Vivo Intact Structure for System-wide Quantitative Analysis of Changes in Proteins

Research Square(2023)10.21203/rs.3.rs-3118982/v1

N/A

0DataRank · unranked

0 citations

Ahrum Son, H. S. Kim, Jolene K. Diedrich, Casimir Bamberger, Daniel B. McClatchy +1 more

In vivo mapping of protein-protein interactions of schizophrenia risk factors generates an interconnected disease network

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.12.571320

N/A

0DataRank · unranked

0 citations

Susan B. Powell, John R. Yates, Daniel B. McClatchy

mRNA-LNP HIV-1 trimer boosters elicit precursors to broad neutralizing antibodies

Science(2024)10.1126/science.adk0582

N/A

0DataRank · unranked

67 citations

Ying‐Cing Lin, Jon M. Steichen, Gabriel Ozorowski, Sven Kratochvil, Rashmi Ray +29 more

Vaccination induces broadly neutralizing antibody precursors to HIV gp41

Nature Immunology(2024)10.1038/s41590-024-01833-w

N/A

0DataRank · unranked

53 citations

Ivy Phung, Rashmi Ray, A. Irimia, Ming Tian, Olivia Swanson +70 more

Single‐Cell Patch‐Clamp/Proteomics of Human Alzheimer's Disease iPSC‐Derived Excitatory Neurons Versus Isogenic Wild‐Type Controls Suggests Novel Causation and Therapeutic Targets

Advanced Science(2024)10.1002/advs.202400545

N/A

0DataRank · unranked

22 citations

Jolene K. Diedrich, Maria Talantova, Nivedita Bhadra, Henry Scott, Meetal Sharma +5 more

A tick saliva serpin, IxsS17 inhibits host innate immune system proteases and enhances host colonization by Lyme disease agent

PLoS Pathogens(2024)10.1371/journal.ppat.1012032

N/A

0DataRank · unranked

18 citations

Tae Heung Kim, Emily Bencosme-Cuevas, Jacquie Berry, Alex Samuel Kiarie Gaithuma, Moiz A. Ansari +7 more

mRNA lipid nanoparticles expressing cell-surface cleavage independent HIV Env trimers elicit autologous tier-2 neutralizing antibodies

Frontiers in Immunology(2024)10.3389/fimmu.2024.1426232

N/A

0DataRank · unranked

12 citations

Mehrdad Alirezaei, Yu Feng, Mohamad‐Gabriel Alameh, Wen-Hsin Lee, Sabyasachi Baboo +13 more

Do Perineuronal Nets Stabilize the Engram of a Synaptic Circuit?

Cells(2024)10.3390/cells13191627

N/A

0DataRank · unranked

12 citations

Sakina P. Lemieux, Thomas J. Deerinck, Eric A. Bushong, Álex Pérez, Denise R. Pritchard +10 more

Integrating DIA Single-Cell Proteomics Data with the DiagnoMass Proteomic Hub for Biological Insights

Journal of the American Society for Mass Spectrometry(2024)10.1021/jasms.4c00187

N/A

0DataRank · unranked

7 citations

Marlon Dias Mariano Santos, Amanda C. Camillo-Andrade, Aline de Lima Leite, Janaína Sena de Souza, Sandra Sánchez +4 more

Using in vivo intact structure for system-wide quantitative analysis of changes in proteins

Nature Communications(2024)10.1038/s41467-024-53582-x

N/A

0DataRank · unranked

7 citations

H. S. Kim, Jolene K. Diedrich, Casimir Bamberger, Daniel B. McClatchy, Stuart A. Lipton +2 more

Acid Cleavable Biotin-Alkyne Improves Sensitivity for Direct Detection of Biotin Labeled Peptides in Biorthogonal Noncanonical Amino Acid Tagging Analysis

Journal of Proteome Research(2024)10.1021/acs.jproteome.4c00616

N/A

0DataRank · unranked

2 citations

Patrick T. Garrett, Titus Jung, Jolene K. Diedrich, John R. Yates, Daniel B. McClatchy

Acid cleavable biotin-alkyne improves sensitivity for direct detection of biotin labeled peptides in BONCAT analysis

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.07.16.603801

N/A

0DataRank · unranked

0 citations

John R. Yates, Daniel B. McClatchy

A Donald F. Hunt Story (John’s Version)

Molecular & Cellular Proteomics(2024)10.1016/j.mcpro.2024.100869

N/A

0DataRank · unranked

0 citations

John R. Yates

HIV broadly neutralizing antibody precursors to the Apex epitope induced in nonhuman primates

Science Immunology(2025)10.1126/sciimmunol.adt6660

N/A

0DataRank · unranked

9 citations

Henry J. Sutton, Payal Pratap, Jon M. Steichen, Diane G. Carnathan, James C. Quinn +38 more

Impact of intermittent lead exposure on hominid brain evolution

Science Advances(2025)10.1126/sciadv.adr1524

N/A

0DataRank · unranked

7 citations

Janaína Sena de Souza, Manish Arora, Christine Austin, Kira Westaway, Ian Moffat +25 more

Mutant prion protein enhances NMDA receptor activity, activates PKC, and triggers rapid excitotoxicity in mice

Journal of Clinical Investigation(2025)10.1172/jci186432

N/A

0DataRank · unranked

6 citations

Julia A. Callender, Joshua E. Mayfield, Daniel B. McClatchy, Daniel Ojeda-Juárez, Mahsa Pourhamzeh +26 more

Accelerated cGMP production of near-native HIV-1 Env trimers following electroporation transfection and immunogenicity analysis

npj Vaccines(2025)10.1038/s41541-025-01218-6

N/A

0DataRank · unranked

3 citations

Elena Gustchina, Javier Guenaga, Victor Ayala, Wen-Hsin Lee, Gabriel Ozorowski +15 more

Plasma Proteome Profiling Reveals Inflammation Markers and Tafamidis Effects in V30M Transthyretin Polyneuropathy

International Journal of Molecular Sciences(2025)10.3390/ijms26125534

N/A

0DataRank · unranked

1 citations

Chung‐Yon Lin, Cecília Monteiro, Teresa Coelho, James J. Moresco, Antônio F. M. Pinto +5 more

Quantitative Proteomic Analysis Reveals JMJD6 and DNAJB11 as Endogenous Substrates of E3 Ligase RFFL

Journal of Proteome Research(2025)10.1021/acs.jproteome.5c00086

N/A

0DataRank · unranked

1 citations

Soumitra Marathe, Sabyasachi Baboo, Daniel B. McClatchy, Jolene K. Diedrich, Parul Jain +4 more

Vaccination with mRNA-encoded membrane-bound HIV Envelope trimer induces neutralizing antibodies in animal models

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.01.24.634423

N/A

0DataRank · unranked

5 citations

Christopher A. Cottrell, Ester Marina-Zárate, Alessia Liguori, Elise Landais, Jonathan L. Torres +40 more

Insights into Free Drug Release from Efficacious N-Acyl O-Aminophenol Duocarmycin Prodrugs

ACS Chemical Biology(2025)10.1021/acschembio.4c00754

N/A

0DataRank · unranked

0 citations

Jelena Momirov, Aleksandar Radakovic, Shreyosree Chatterjee, Aaron M. Kirchhoff, Albrecht Kolb +11 more

Evolutionary Persistence of DNA Methylation for Millions of Years after Ancient Loss of a De Novo Methyltransferase

Cell(2020)10.1016/j.cell.2019.12.012

N/A

0DataRank · unranked

153 citations

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