🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Amanda McQuade

University of California, San Francisco

ORCID: 0000-0001-5368-6788

Also affiliated with Institute for Neurodegenerative Disorders

NeuroscienceMedicineImmunology and MicrobiologyBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile

2.0Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Multi-omic comparison of Alzheimer’s variants in human ESC–derived microglia reveals convergence at APOE

The Journal of Experimental Medicine(2020)10.1084/jem.20200474

Top 11%

2.0DataRank

Top 11%73 citations

Bing Zhu, Yan Liu, Xiaoming Zhang, Jun Yin, Xiaoguang Li +11 more

Papers

Driven by 14 papers — median percentile 89. Top paper: “Multi-omic comparison of Alzheimer’s variants in human ESC–derived microglia reveals convergence at APOE”.

Multi-omic comparison of Alzheimer’s variants in human ESC–derived microglia reveals convergence at APOE

The Journal of Experimental Medicine(2020)10.1084/jem.20200474

Top 11%

2.0DataRank

Top 11%73 citations

Bing Zhu, Yan Liu, Xiaoming Zhang, Jun Yin, Xiaoguang Li +11 more

TREM2 regulates purinergic receptor-mediated calcium signaling and motility in human iPSC-derived microglia

eLife(2022)10.7554/elife.73021

N/A

1.6DataRank · unranked

61 citations

Amanda McQuade, Alberto Granzotto, You Jung Kang, Jean Paul Chadarevian, Sunil Gandhi +8 more

Gene expression and functional deficits underlie TREM2-knockout microglia responses in human models of Alzheimer’s disease

Nature Communications(2020)10.1038/s41467-020-19227-5

N/A

0.882DataRank · unranked

358 citations

You Jung Kang, Jonathan Hasselmann, Amit Jairaman, Alexandra Sotelo, Morgan Coburn +17 more

Prevention of Transgene Silencing During Human Pluripotent Stem Cell Differentiation

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.04.07.647695

N/A

0.312DataRank · unranked

7 citations

Alan Napole, Aninda Dibya Saha, Duo Sun, Angelina Singavarapu, Liz Calzada +22 more

Transcriptional regulation of disease-relevant microglial activation programs

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.10.12.681832

N/A

0.241DataRank · unranked

4 citations

Reet Mishra, Venus Hagan, Weiwei Liang, Peter Colias, Vincent Cele Castillo +12 more

ER and SOCE Ca 2+ signals are not required for directed cell migration in human microglia

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.18.576126

N/A

0.208DataRank · unranked

3 citations

Amanda McQuade, Jean Paul Chadarevian, Hayk Davtyan, Stefano L. Sensi, Ian Parker +3 more

CRISPRi-based screen of Autism Spectrum Disorder risk genes in microglia uncovers roles of ADNP in microglia endocytosis and synaptic pruning

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.06.01.596962

N/A

0.208DataRank · unranked

3 citations

Amanda McQuade, Venus Hagan, Weiwei Liang, Nina M. Dräger, Sydney M. Sattler +9 more

TREM2 regulates purinergic receptor-mediated calcium signaling and motility in human iPSC-derived microglia

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.08.24.457491

N/A

0.165DataRank · unranked

2 citations

Amanda McQuade, Alberto Granzotto, You Jung Kang, Jean Paul Chadarevian, Sunil Gandhi +8 more

ER and SOCE Ca2+ signals are not required for directed cell migration in human iPSC-derived microglia

Cell Calcium(2024)10.1016/j.ceca.2024.102923

N/A

0DataRank · unranked

3 citations

Amanda McQuade, Jean Paul Chadarevian, Hayk Davtyan, Stefano L. Sensi, Ian Parker +3 more

Comparing Functional Consequences of Human iPSC ‐Microglia and Neural Stem Cell‐Derived Extracellular Vesicles in Mitigating Cognitive Decline in Alzheimer's Disease

Aging Cell(2025)10.1111/acel.70341

N/A

0DataRank · unranked

7 citations

Mineh Markarian, Shreya Madan, Devyani Swami, Amanda McQuade, Janet E. Baulch +3 more

Absence of microglia promotes diverse pathologies and early lethality in Alzheimer’s disease mice

Cell Reports(2022)10.1016/j.celrep.2022.110961

N/A

0DataRank · unranked

184 citations

Samuel Morabito, Emma Danhash, Amanda McQuade, Jessica Sanchez, Emily Miyoshi +16 more

Cellular and molecular phenotypes of C9orf72 ALS/FTD patient derived iPSC-microglia mono-cultures

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.03.277459

N/A

0DataRank · unranked

6 citations

Eric Alsop, Jennifer Lévy, Lauren M. Gittings, Deepti Lall, Benjamin E. Rabichow +27 more

Moderate intrinsic phenotypic alterations in C9orf72 ALS/FTD iPSC-microglia despite the presence of C9orf72 pathological features

Frontiers in Cellular Neuroscience(2023)10.3389/fncel.2023.1179796

N/A

0DataRank · unranked

23 citations

Eric Alsop, Jennifer Lévy, Lauren M. Gittings, Deepti Lall, Benjamin E. Rabichow +27 more

Neurotoxic Microglial Activation via IFNγ‐Induced Nrf2 Reduction Exacerbating Alzheimer's Disease

Advanced Science(2024)10.1002/advs.202304357

N/A

0DataRank · unranked

23 citations

Seung Jae Hyeon, Amanda McQuade, Jiwoon Lim, Seung Hyun Baek, Yen N. Diep +8 more