🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Joanna Collins

Wellcome Sanger Institute

ORCID: 0000-0001-5782-5028
Biochemistry, Genetics and Molecular BiologyAgricultural and Biological Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile
24.5Author DataRank

Indexed papers

9in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 9 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Evaluation of GRCh38 and de novo haploid genome assemblies demonstrates the enduring quality of the reference assembly

Genome Research(2017)10.1101/gr.213611.116
Top 2%
8.0DataRank
Top 2%1305 citations

Thibaut Hourlier, Lon Phan, Hsiu-Chuan Chen, Paul A. Kitts, Terence D. Murphy +37 more

Papers

Driven by 13 papers — median percentile 75. Top paper: “Evaluation of GRCh38 and de novo haploid genome assemblies demonstrates the enduring quality of the reference assembly”.

Evaluation of GRCh38 and de novo haploid genome assemblies demonstrates the enduring quality of the reference assembly

Genome Research(2017)10.1101/gr.213611.116
Top 2%
8.0DataRank
Top 2%1305 citations

Thibaut Hourlier, Lon Phan, Hsiu-Chuan Chen, Paul A. Kitts, Terence D. Murphy +37 more

Towards complete and error-free genome assemblies of all vertebrate species

Nature(2021)10.1038/s41586-021-03451-0
Top 3%
6.0DataRank
Top 3%3155 citations

Shane A McCarthy, Olivier Fédrigo, Joana Damas, Giulio Formenti, Sergey Koren +95 more

Towards complete and error-free genome assemblies of all vertebrate species

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.22.110833
Top 5%
4.3DataRank
Top 5%195 citations

Shane A McCarthy, Olivier Fédrigo, Joana Damas, Giulio Formenti, Sergey Koren +95 more

Evaluation of GRCh38 and de novo haploid genome assemblies demonstrates the enduring quality of the reference assembly

bioRxiv (Cold Spring Harbor Laboratory)(2016)10.1101/072116
Top 6%
3.8DataRank
Top 6%118 citations

Tina A. Graves-Lindsay, Thibaut Hourlier, Lon Phan, Hsiu-Chuan Chen, Paul A. Kitts +34 more

Scalable, accessible and reproducible reference genome assembly and evaluation in Galaxy

Nature Biotechnology(2024)10.1038/s41587-023-02100-3
N/A
1.2DataRank · unranked
69 citations

Linelle Abueg, Nadolina Brajuka, Cristóbal Gallardo Alba, Björn Grüning, Byung June Ko +36 more

A chromosome-level reference genome and pangenome for barn swallow population genomics

Cell Reports(2023)10.1016/j.celrep.2023.111992
Top 25%
0.821DataRank
Top 25%33 citations

Guido Roberto Gallo, Marcella Sozzoni, Alessio Iannucci, Elena Galati, Linelle Abueg +34 more

Automated assembly of high-quality diploid human reference genomes

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.03.06.483034
Top 28%
0.719DataRank
Top 28%22 citations

Giulio Formenti, Arang Rhie, Andrea Guarracino, Chentao Yang, Jonathan M. D. Wood +77 more

The admixed brushtail possum genome reveals invasion history in New Zealand and novel imprinted genes

Nature Communications(2023)10.1038/s41467-023-41784-8
Top 43%
0.430DataRank
Top 43%13 citations

Oscar Ortega‐Recalde, Melanie K. Laird, Takashi Hayakawa, Kyle S. Richardson, Finlay.C. B. Reese +21 more

Scalable, accessible, and reproducible reference genome assembly and evaluation in Galaxy

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.28.546576
N/A
0.373DataRank · unranked
11 citations

Linelle Abueg, Nadolina Brajuka, Cristóbal Gallardo Alba, Björn Grüning, Byung June Ko +32 more

The genome sequence of the nematode Caenorhabditis drosophilae (Rhabditida, Rhabditidae) (Kiontke, 1997)

Wellcome Open Research(2024)10.12688/wellcomeopenres.22416.1
Top 62%
0.229DataRank
Top 62%3 citations

Lewis Stevens, Joanna Collins, Richard Challis, Manuela R. Kieninger

Genomic and genetic insights into speciation and pigment pattern diversification in Danio fishes

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.10.17.682988
N/A
0.208DataRank · unranked
3 citations

Marco Podobnik, Junrou Huang, Braedan M. McCluskey, Shane A McCarthy, Jonathan M. D. Wood +15 more

Pangenomics provides insights into the role of synanthropy in barn swallow evolution

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.03.28.486082
Top 65%
0.197DataRank
Top 65%2 citations

Guido Roberto Gallo, Marcella Sozzoni, Alessio Iannucci, Elena Galati, Linelle Abueg +34 more

The swan genome and transcriptome: its not all black and white

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.05.02.490350
N/A
0.104DataRank · unranked
1 citations

Yuanyuan Cheng, Keng Yih Chew, Arjun Challgula, R.H. Kraus, Ralf Mueller +41 more