🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Andrew Maltez Thomas

University of Trento

ORCID: 0000-0001-5789-3354
Biochemistry, Genetics and Molecular BiologyMedicineAgricultural and Biological Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile
5.5Author DataRank

Indexed papers

2in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Extending and improving metagenomic taxonomic profiling with uncharacterized species using MetaPhlAn 4

Indice penale(2023)10.1038/s41587-023-01688-w
Top 4%
5.0DataRank
Top 4%1390 citations

Francesco Beghini, Fabio Cumbo, Lauren J. McIver, Kelsey N. Thompson, Moreno Zolfo +21 more

Papers

Driven by 16 papers — median percentile 77. Top paper: “Extending and improving metagenomic taxonomic profiling with uncharacterized species using MetaPhlAn 4”.

Extending and improving metagenomic taxonomic profiling with uncharacterized species using MetaPhlAn 4

Indice penale(2023)10.1038/s41587-023-01688-w
Top 4%
5.0DataRank
Top 4%1390 citations

Francesco Beghini, Fabio Cumbo, Lauren J. McIver, Kelsey N. Thompson, Moreno Zolfo +21 more

Meta-analysis of fecal metagenomes reveals global microbial signatures that are specific for colorectal cancer

Nature Medicine(2019)10.1038/s41591-019-0406-6
N/A
1.1DataRank · unranked
1351 citations

Paul Theodor Pyl, Ece Kartal, Konrad Zych, Alireza Kashani, Alessio Milanese +32 more

Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation

Nature Medicine(2019)10.1038/s41591-019-0405-7
N/A
1.0DataRank · unranked
1030 citations

Paolo Manghi, Francesco Asnicar, Edoardo Pasolli, Federica Armanini, Moreno Zolfo +36 more

Precise phylogenetic analysis of microbial isolates and genomes from metagenomes using PhyloPhlAn 3.0

Nature Communications(2020)10.1038/s41467-020-16366-7
N/A
1.0DataRank · unranked
917 citations

Andrew Maltez Thomas, Francesco Beghini, Claudia Mengoni, Serena Manara, Paolo Manghi +13 more

Intestinal Akkermansia muciniphila predicts clinical response to PD-1 blockade in patients with advanced non-small-cell lung cancer

Nature Medicine(2022)10.1038/s41591-021-01655-5
N/A
0.975DataRank · unranked
665 citations

Bertrand Routy, Andrew Maltez Thomas, Valerio Iebba, Gérard Zalcman, S. Friard +38 more

Cross-cohort gut microbiome associations with immune checkpoint inhibitor response in advanced melanoma

Nature Medicine(2022)10.1038/s41591-022-01695-5
N/A
0.914DataRank · unranked
443 citations

Andrew Maltez Thomas, Laura A. Bolte, Johannes R. Björk, Laura Kist de Ruijter, Federica Armanini +35 more

Large-scale metagenomic analysis of oral microbiomes reveals markers for autism spectrum disorders

Nature Communications(2024)10.1038/s41467-024-53934-7
N/A
0.787DataRank · unranked
33 citations

Michele Filosi, Moreno Zolfo, Lucas G. Casten, Albert García-Valiente, Stefania Mattevi +18 more

Longitudinal gut microbiome changes in immune checkpoint blockade-treated advanced melanoma

Nature Medicine(2024)10.1038/s41591-024-02803-3
N/A
0.736DataRank · unranked
134 citations

Laura A. Bolte, Andrew Maltez Thomas, Karla A. Lee, Niccolò Rossi, Thijs T. Wind +35 more

Gut OncoMicrobiome Signatures (GOMS) as next-generation biomarkers for cancer immunotherapy

Nature Reviews Clinical Oncology(2023)10.1038/s41571-023-00785-8
N/A
0.728DataRank · unranked
127 citations

Marine Fidelle, Bertrand Routy, Guido Kroemer, Jennifer A. Wargo, Nicola Segata +2 more

Immune system and intestinal microbiota determine efficacy of androgen deprivation therapy against prostate cancer

Journal for ImmunoTherapy of Cancer(2022)10.1136/jitc-2021-004191
N/A
0.655DataRank · unranked
78 citations

Anne‐Gaëlle Goubet, Kousuke Ueda, Andrew Maltez Thomas, Valentin Quiniou, Cassandra Thélémaque +32 more

MetaPhlAn 4 profiling of unknown species-level genome bins improves the characterization of diet-associated microbiome changes in mice

Cell Reports(2023)10.1016/j.celrep.2023.112464
N/A
0.581DataRank · unranked
47 citations

Aitor Blanco‐Míguez, Serena Manara, Amir Nabinejad, Fabio Cumbo, Francesco Beghini +19 more

Meta-analysis of 22,710 human microbiome metagenomes defines an oral-to-gut microbial enrichment score and associations with host health and disease

Nature Communications(2025)10.1038/s41467-025-66888-1
Top 41%
0.461DataRank
Top 41%17 citations

Giacomo Antonello, Lucas Schiffer, Davide Golzato, Andres Wokaty, Francesco Beghini +32 more

Genes Encoding Microbial Acyl Coenzyme A Binding Protein/Diazepam-Binding Inhibitor Orthologs Are Rare in the Human Gut Microbiome and Show No Links to Obesity

Applied and Environmental Microbiology(2021)10.1128/aem.00471-21
N/A
0DataRank · unranked
10 citations

Francesco Asnicar, Guido Kroemer, Nicola Segata, Andrew Maltez Thomas

Extension of the Segatella copri complex to 13 species with distinct large extrachromosomal elements and associations with host conditions

Cell Host & Microbe(2023)10.1016/j.chom.2023.09.013
N/A
0DataRank · unranked
70 citations

Eric J. C. Gálvez, Edoardo Pasolli, Francesca De Filippis, Lena Amend, Kun D. Huang +20 more

Integrating taxonomic, functional, and strain-level profiling of diverse microbial communities with bioBakery 3

eLife(2021)10.7554/elife.65088
N/A
0DataRank · unranked
2321 citations

Lauren J. McIver, Aitor Blanco‐Míguez, Léonard Dubois, Francesco Asnicar, Sagun Maharjan +12 more

Integrating taxonomic, functional, and strain-level profiling of diverse microbial communities with bioBakery 3

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.19.388223
N/A
0DataRank · unranked
145 citations

Lauren J. McIver, Aitor Blanco‐Míguez, Léonard Dubois, Francesco Asnicar, Sagun Maharjan +11 more