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MetaPhlAn 4 profiling of unknown species-level genome bins improves the characterization of diet-associated microbiome changes in mice

Cell Reports(2023)10.1016/j.celrep.2023.112464Source: DataRank Database

MetaPhlAn 4 profiling of unknown species-level genome bins improves the characterization of diet-associated microbiome changes in mice is a research paper published in Cell Reports (2023). On theSindex it has a DataRank of 0. It has been cited 45 times.

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Open Access45 citations

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Enrichment:Funding (18 grants)Impact (FWCI 4.38)OA: goldTopics (50)IDs (PubMed, PMC, OpenAlex)Annotations (2)

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Context only (not used in score)

Findable (1/2)

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Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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Authors (24)

Aitor Blanco‐Míguez ORCID,Serena Manara ORCID,Amir Nabinejad ORCID,Fabio Cumbo ORCID,Francesco Beghini ORCID

Live enrichment

PubMed:37141097 PMC:PMC10242440 OpenAlex:https://openalex.org/W4368360101

Volkswagen Foundation

Grant: 76251-99

Volkswagen Foundation

Grant: CoG 865466

National Institutes of Health

Grant: 1U01CA230551

Horizon 2020

Grant: ERC-2016-StG-71577

European Research Council

Grant: MetaPG-716575

H2020

Grant: MASTER-818368

H2020

Grant: ONCOBIOME-825410

European Research Council

Grant: 101001355

Aggression and the Gut Microbiome

European Research Council

Grant: 865466

Spatio-Temporal Regulation of Inflammation and Tissue Regeneration: Studying the immune system - tissue - microbiota communication to develop targeted therapies for immune-mediated diseases and cancer

European Research Council

Grant: 716575

Culture-free strain-level population genomics to identify disappearing human-associated microbes in the westernized world

European Research Council

Grant: 101045015

Transmission of the human microbiome and its impact on health

NCI NIH HHS

Grant: U01 CA230551

European Commission

Grant: 825410

Gut OncoMicrobiome Signatures (GOMS) associated with cancer incidence, prognosis and prediction of treatment response.

European Commission

Grant: 818368

Microbiome Applications for Sustainable food systems through Technologies and EnteRprise

National Institutes of Health

Grant: 1U01CA230551-01A1

Exploiting public metagenomic data to uncover cancer-microbiome relationships

Horizon 2020 Framework Programme

European Research Council

National Cancer Institute

FWCI

4.38

Citation Percentile

1.0%

Citation Trend

2023

2024

2025

2026

goldLicense: cc-by

journalhttp://www.cell.com/article/S2211124723004758/pdf

publisherhttp://www.cell.com/article/S2211124723004758/pdf

publisherhttps://api.elsevier.com/content/article/PII:S2211124723004758?httpAccept=text/xml

publisherhttps://api.elsevier.com/content/article/PII:S2211124723004758?httpAccept=text/plain

journalhttps://doi.org/10.1016/j.celrep.2023.112464

Fields of Study

Gut microbiota and healthEpigenetics and DNA MethylationGenomics and Phylogenetic Studies0301 basic medicine03 medical and health sciences

MeSH Terms

Gastrointestinal MicrobiomeAnimalsDietMiceMetagenomeMetagenomicsMicrobiota

Keywords

MetagenomicsMicrobiomeBiologyComputational biologyGenomeShotgun sequencingProfiling (computer programming)ShotgunHuman Microbiome ProjectGeneticsGeneComputer scienceDietMouse MicrobiomeCp: MicrobiologyUncharacterized Microbial SpeciesMetaphlan570QH301-705.5[SDV]Life Sciences [q-bio]MicrobiologyCP: Microbiology; MetaPhlAn; diet; metagenomics; mouse microbiome; uncharacterized microbial speciesMESH: Gastrointestinal Microbiome576MiceMESH: DietReportAnimalsMESH: AnimalsBiology (General)MESH: MiceMESH: Microbiota / geneticsMicrobiotaMESH: MetagenomeGastrointestinal Microbiome[SDV] Life Sciences [q-bio]MetagenomeMESH: Metagenomics / methods

MetaPhlAn 4 profiling of unknown species-level genome bins improves the characterization of diet-associated microbiome changes in mice

FAIR Checklist

Authors (24)

Funding (18 grants)

Impact

Open Access

Topics

Annotations (Europe PMC)